CF834295

Overview
NameCF834295
Unique NameCF834295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_PSEAE (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.362e-26
Identity = 63/128 (49.22%), Postives = 85/128 (66.41%), Query Frame = -2 
Query:  214 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFT--WEVVKPLKWEK 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA RC +QVSYAIGV +P S+ ++++GTGK+ D++I+++V+E  D RP  +T  LDL    +  +   AAYGHFGR   + T   +      WEK
Sbjct:  259 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEK 383
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_PSEAB (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.362e-26
Identity = 63/128 (49.22%), Postives = 85/128 (66.41%), Query Frame = -2 
Query:  214 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFT--WEVVKPLKWEK 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA RC +QVSYAIGV +P S+ ++++GTGK+ D++I+++V+E  D RP  +T  LDL    +  +   AAYGHFGR   + T   +      WEK
Sbjct:  259 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEK 383
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_PSEA8 (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa (strain LESB58) GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.362e-26
Identity = 63/128 (49.22%), Postives = 85/128 (66.41%), Query Frame = -2 
Query:  214 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFT--WEVVKPLKWEK 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA RC +QVSYAIGV +P S+ ++++GTGK+ D++I+++V+E  D RP  +T  LDL    +  +   AAYGHFGR   + T   +      WEK
Sbjct:  259 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEK 383
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_PSEA7 (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa (strain PA7) GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.362e-26
Identity = 63/128 (49.22%), Postives = 85/128 (66.41%), Query Frame = -2 
Query:  214 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFT--WEVVKPLKWEK 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA RC +QVSYAIGV +P S+ ++++GTGK+ D++I+++V+E  D RP  +T  LDL    +  +   AAYGHFGR   + T   +      WEK
Sbjct:  259 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEK 383
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_PROMH (S-adenosylmethionine synthetase OS=Proteus mirabilis (strain HI4320) GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.362e-26
Identity = 63/117 (53.85%), Postives = 80/117 (68.38%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GT KIP  +++ +V+E  D RP  +   LDL    +  + K AAYGHFGR   +F WE
Sbjct:  258 HGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKIPTSQLILLVREFFDLRPYGLIQMLDLL---HPIYQKTAAYGHFGR--AEFPWE 369
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_DESAP (S-adenosylmethionine synthetase OS=Desulforudis audaxviator (strain MP104C) GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.362e-26
Identity = 61/117 (52.14%), Postives = 81/117 (69.23%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ +Y  R  AK+IVA+GLA RC V V+YAIGV +P++L VD++GTG I ++ + K+V E  D RP  +  +LDL+R     + + AAYGHFGR D +  WE
Sbjct:  267 HGGGAFSGKDPTKVDRSASYAARYVAKNIVAAGLASRCEVHVAYAIGVAKPVALRVDTFGTGLINEERLEKLVLEHFDLRPAAIIHHLDLRR---PIYRQVAAYGHFGRGDLNLPWE 380
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BACP2 (S-adenosylmethionine synthetase OS=Bacillus pumilus (strain SAFR-032) GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.362e-26
Identity = 58/117 (49.57%), Postives = 82/117 (70.09%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKD  KVDR+ AY  R  AK+IVA+GLA  C VQ++YAIGV +P+S+ +D++GTGK  +++++++V+ + D RP  +   LDL+R     + + AAYGHFGR D D  WE
Sbjct:  272 HGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLADSCEVQLAYAIGVAQPVSISIDTFGTGKASEEKLIEVVRANFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRHDLDLPWE 385
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BACHK (S-adenosylmethionine synthetase OS=Bacillus thuringiensis subsp. konkukian GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.362e-26
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKD  KVDR+ AY  R  AK+IVA+GLA +  VQ++YAIGV +P+S+ VD++GTGK+ +  ++++V+ + D RP  +   LDL+R     + + AAYGHFGR D D TWE
Sbjct:  272 HGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLAEKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVDLTWE 385
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BACC7 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain AH187) GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.362e-26
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKD  KVDR+ AY  R  AK+IVA+GLA +  VQ++YAIGV +P+S+ VD++GTGK+ +  ++++V+ + D RP  +   LDL+R     + + AAYGHFGR D D TWE
Sbjct:  272 HGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLAEKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVDLTWE 385
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_ACIBT (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=metK PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.362e-26
Identity = 62/119 (52.10%), Postives = 84/119 (70.59%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPD--FTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ ++++GT K+ D+ I+++V+E  D RP  +T  L+L +     + + AAYGHFGR+  D  FTWE
Sbjct:  259 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTAKVSDELIIQLVREHFDLRPFGITRMLNLIQ---PMYKQTAAYGHFGREGSDTAFTWE 374
The following BLAST results are available for this feature:
BLAST of CF834295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PSEAE2.362e-2649.22S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_PSEAB2.362e-2649.22S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_PSEA82.362e-2649.22S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_PSEA72.362e-2649.22S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_PROMH2.362e-2653.85S-adenosylmethionine synthetase OS=Proteus mirabil... [more]
METK_DESAP2.362e-2652.14S-adenosylmethionine synthetase OS=Desulforudis au... [more]
METK_BACP22.362e-2649.57S-adenosylmethionine synthetase OS=Bacillus pumilu... [more]
METK_BACHK2.362e-2650.43S-adenosylmethionine synthetase OS=Bacillus thurin... [more]
METK_BACC72.362e-2650.43S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_ACIBT2.362e-2652.10S-adenosylmethionine synthetase OS=Acinetobacter b... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_05E14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834295 ID=CF834295; Name=CF834295; organism=Citrus sinensis; type=EST; length=598bp
GGAACATTAAACCAAAACCAAAAAAGACCTCGGGGAAAGAAGAAAAAGAA
AGGAATTGAATGGGGAACATGTATGAGTTCCGAACACAGGAGATTTGCTT
AGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACC
AATAGAAGCAAACTTGAACAGGAGGGATAGTTTGCACTTTTCAACTCAAA
TTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTG
AAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGGCTTCAAGAA
CCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTG
GCCTGAAATCAGAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGA
ATCTTGCCGGTTCCATATGAGTCCACAAAAAGAGACAATGGCTCAGGCAC
ACCTATGGCATACGAGACTTGGACAATGCACCTGGGAGCAAGCCCGCTTG
CAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCAGTCCTATCC
ACCTTAGGAGGGTCTTTTCCAAAGAAAGCACAGCCACCATGGGCTCCC
back to top