CF834295

Overview
NameCF834295
Unique NameCF834295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_ACIBS (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain SDF) GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.362e-26
Identity = 62/119 (52.10%), Postives = 84/119 (70.59%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPD--FTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ ++++GT K+ D+ I+++V+E  D RP  +T  L+L +     + + AAYGHFGR+  D  FTWE
Sbjct:  259 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTAKVSDELIIQLVREHFDLRPFGITRMLNLIQ---PMYKQTAAYGHFGREGSDTAFTWE 374          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_ACIBC (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ACICU) GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.362e-26
Identity = 62/119 (52.10%), Postives = 84/119 (70.59%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPD--FTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ ++++GT K+ D+ I+++V+E  D RP  +T  L+L +     + + AAYGHFGR+  D  FTWE
Sbjct:  259 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTAKVSDELIIQLVREHFDLRPFGITRMLNLIQ---PMYKQTAAYGHFGREGSDTAFTWE 374          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_YERE8 (S-adenosylmethionine synthetase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=metK PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.085e-26
Identity = 62/117 (52.99%), Postives = 81/117 (69.23%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GTGKI +  ++ +V+E  + RP  +   LDL    +  + K AAYGHFGR+  +F WE
Sbjct:  258 HGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTGKIAEDRLVALVREFFELRPYGLIQMLDLL---HPIYRKTAAYGHFGRE--EFPWE 369          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_TRIEI (S-adenosylmethionine synthetase OS=Trichodesmium erythraeum (strain IMS101) GN=metK PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.085e-26
Identity = 59/121 (48.76%), Postives = 83/121 (68.60%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKR---GGNGRFLKP-AAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+ LA +C VQ+SYAIGV +P+S+ ++++GT K+ + ++L++VKE+ + RP  +  N +L+       GRF +  AAYGH GR D D  WE
Sbjct:  279 HGGGAFSGKDPTKVDRSAAYACRYIAKNIVAADLAEKCEVQISYAIGVAKPVSMMIETFGTSKVDEDKLLEVVKENFELRPAGIIQNFNLRNLPGERGGRFYQDVAAYGHLGRTDLDLPWE 399          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_CORU7 (S-adenosylmethionine synthetase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=metK PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.085e-26
Identity = 62/117 (52.99%), Postives = 78/117 (66.67%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA R  VQV+YAIGV  P+ L+V+++GT K P ++I + V E  D RP  +   LDL R     + + AAYGHFGR+D D  WE
Sbjct:  273 HGGGAFSGKDPSKVDRSAAYATRWVAKNIVAAGLADRAEVQVAYAIGVARPVGLYVETFGTEKAPVEDIQRAVAEVFDLRPASILRELDLLR---PIYAQTAAYGHFGRNDLDLPWE 386          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_CLOPH (S-adenosylmethionine synthetase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=metK PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.085e-26
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKD  KVDR+ +Y  R  AK+IVASGLA +C +Q+SYAIGV +P S+ +D++GTGK  ++E+ +IV++  D RP  +   LDL+R     + + AAYGHFGR+D +  WE
Sbjct:  271 HGGGAFSGKDCTKVDRSASYAARYVAKNIVASGLADKCEIQLSYAIGVAQPTSIMIDTFGTGKKSNEELTEIVRKHFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRNDLNLPWE 384          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_ALKOO (S-adenosylmethionine synthetase OS=Alkaliphilus oremlandii (strain OhILAs) GN=metK PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.085e-26
Identity = 57/117 (48.72%), Postives = 80/117 (68.38%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKD  KVDR+ AY  R  AK+IVA+GLA +C ++++YAIGV  P+S+ V+++GTGKI + +I +++ +  D RP  +  +L L+  G   +   AAYGHFGR D D TWE
Sbjct:  268 HGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLADKCEIELAYAIGVSRPISILVETFGTGKIAEADIAELIGKHFDLRPAAIIRDLGLRNPG---YRNVAAYGHFGRADLDLTWE 381          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_XANCP (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. campestris GN=metK PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.030e-26
Identity = 62/116 (53.45%), Postives = 80/116 (68.97%), Query Frame = -2
Query:  244 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTW 591
            HGG AF GKDP KVDR+ AY  R  AK++VA+GLA RC VQVSYAIGV EP S+ V ++GTGKI D+ I K++++  D RP  +   LDL    +  + + A+YGHFGR   DFT+
Sbjct:  260 HGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKIADELIEKLIRKHFDLRPFGIIQMLDLI---HPMYQQTASYGHFGRKPKDFTY 372          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_XANCB (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. campestris (strain B100) GN=metK PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.030e-26
Identity = 62/116 (53.45%), Postives = 80/116 (68.97%), Query Frame = -2
Query:  244 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTW 591
            HGG AF GKDP KVDR+ AY  R  AK++VA+GLA RC VQVSYAIGV EP S+ V ++GTGKI D+ I K++++  D RP  +   LDL    +  + + A+YGHFGR   DFT+
Sbjct:  260 HGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKIADELIEKLIRKHFDLRPFGIIQMLDLI---HPMYQQTASYGHFGRKPKDFTY 372          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_XANC8 (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=metK PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.030e-26
Identity = 62/116 (53.45%), Postives = 80/116 (68.97%), Query Frame = -2
Query:  244 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTW 591
            HGG AF GKDP KVDR+ AY  R  AK++VA+GLA RC VQVSYAIGV EP S+ V ++GTGKI D+ I K++++  D RP  +   LDL    +  + + A+YGHFGR   DFT+
Sbjct:  260 HGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKIADELIEKLIRKHFDLRPFGIIQMLDLI---HPMYQQTASYGHFGRKPKDFTY 372          
The following BLAST results are available for this feature:
BLAST of CF834295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ACIBS2.362e-2652.10S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBC2.362e-2652.10S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_YERE83.085e-2652.99S-adenosylmethionine synthetase OS=Yersinia entero... [more]
METK_TRIEI3.085e-2648.76S-adenosylmethionine synthetase OS=Trichodesmium e... [more]
METK_CORU73.085e-2652.99S-adenosylmethionine synthetase OS=Corynebacterium... [more]
METK_CLOPH3.085e-2650.43S-adenosylmethionine synthetase OS=Clostridium phy... [more]
METK_ALKOO3.085e-2648.72S-adenosylmethionine synthetase OS=Alkaliphilus or... [more]
METK_XANCP4.030e-2653.45S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]
METK_XANCB4.030e-2653.45S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]
METK_XANC84.030e-2653.45S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834295 ID=CF834295; Name=CF834295; organism=Citrus sinensis; type=EST; length=598bp
GGAACATTAAACCAAAACCAAAAAAGACCTCGGGGAAAGAAGAAAAAGAA
AGGAATTGAATGGGGAACATGTATGAGTTCCGAACACAGGAGATTTGCTT
AGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACC
AATAGAAGCAAACTTGAACAGGAGGGATAGTTTGCACTTTTCAACTCAAA
TTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTG
AAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGGCTTCAAGAA
CCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTG
GCCTGAAATCAGAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGA
ATCTTGCCGGTTCCATATGAGTCCACAAAAAGAGACAATGGCTCAGGCAC
ACCTATGGCATACGAGACTTGGACAATGCACCTGGGAGCAAGCCCGCTTG
CAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCAGTCCTATCC
ACCTTAGGAGGGTCTTTTCCAAAGAAAGCACAGCCACCATGGGCTCCC
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