CF834295

Overview
NameCF834295
Unique NameCF834295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 9.503e-60
Identity = 115/131 (87.79%), Postives = 120/131 (91.60%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAYIVRQAAKSIVASGLA R IVQVSYAIGVPEPLS+FVDSYGTGKIPDKEIL+IVKES DFRPGM++INLDLKRGGNGRFLK AAYGHFGRDD DFTWEVVKPLK  K QA
Sbjct:  263 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRVIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKSNKVQA 393          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 9.503e-60
Identity = 112/130 (86.15%), Postives = 119/130 (91.54%), Query Frame = -2
Query:  208 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQ 597
            GAHGG AF GKDP KVDR+GAYIVRQAAKS+VA+GLA RCIVQVSYAIGVPEPLS+FVD+YGTG IPDKEILKIVKE+ DFRPGM+ INLDLKRGGNGRFLK AAYGHFGRDD DFTWEVVKPLK EK Q
Sbjct:  263 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGMIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDTDFTWEVVKPLKCEKAQ 392          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_WHEAT (S-adenosylmethionine synthetase OS=Triticum aestivum GN=SAMS PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.621e-59
Identity = 109/131 (83.21%), Postives = 119/131 (90.84%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAY+ RQAAKSIVASG+A RCIVQVSYAIGVPEPLS+FVD+YGTGKIPDKEIL+IVKE+ DFRPGM+ INLDLKRGG GR+LK AAYGHFGR+  DFTWEVVKPLKWEKP A
Sbjct:  266 GAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGIARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILEIVKENFDFRPGMIIINLDLKRGGKGRYLKTAAYGHFGREGADFTWEVVKPLKWEKPSA 396          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.621e-59
Identity = 111/131 (84.73%), Postives = 119/131 (90.84%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAYIVRQAAKSIVA+GLA R IVQVSYAIGVPEPLS+FVD+YGTGKIPDK+ILKIVKE+ DFRPGM++INLDLKRGGN RF K AAYGHFGRDDPDFTWE VKPLKWEK  A
Sbjct:  263 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKENFDFRPGMISINLDLKRGGNARFQKTAAYGHFGRDDPDFTWETVKPLKWEKVPA 393          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.765e-59
Identity = 110/131 (83.97%), Postives = 121/131 (92.37%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAYI RQAAKSIVASGLA RCIVQ+SYAIGVPEPLS+FVD+YGTGKIPDK+ILKIVKE+ DFRPGM+ INLDL +GG+ R+LK AAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  267 GAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 396          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 6.160e-59
Identity = 110/131 (83.97%), Postives = 117/131 (89.31%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAYIVRQAAKSIVA+GLA RC+VQVSYAIGV   LS+FVDSYGTG IPDKEIL+I+KE  DFRPGM+TINLDLKRGGNGRF K AAYGHFGRDDPDFTWE VKPLKWEK QA
Sbjct:  263 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVRGALSIFVDSYGTGSIPDKEILEIIKEHFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWEKAQA 393          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.372e-58
Identity = 109/123 (88.62%), Postives = 116/123 (94.31%), Query Frame = -2
Query:  229 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKP 597
            GAHGG AF GKDP KVDR+GAYIVRQAAKSIVA+GLA RCIVQVSYAIGVPEPLS++VD+YGTGKIPDKEILKIVKE+ DFRPGM+TINLDLKRGGN RFLK AAYGHFGRDDPDFTWEVVKP
Sbjct:  263 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVYVDTYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKP 385          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.372e-58
Identity = 110/131 (83.97%), Postives = 119/131 (90.84%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAYI RQAAKSIVA+GLA RCIVQ+SYAIGVPEPLS+FVD+YGTGKIPDKEILKIVKES DFRPGM+ INLDL +GG+ R+LK AAYGHFGRDD DFTWE VKPLKWEKPQA
Sbjct:  267 GAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEKPQA 396          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_MEDFA (S-adenosylmethionine synthetase OS=Medicago falcata GN=SAMS PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.792e-58
Identity = 111/128 (86.72%), Postives = 117/128 (91.41%), Query Frame = -2
Query:  214 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEK 597
            GAHGG AF GKDP KVDR+GAYIVRQAAKSIVA+GLA RCIVQVSYAIGVPEPLS+FVDSYGTGKIPDKEIL IVKE+ DFRPGM++INLDLKRGGN RFLK AAYGHFGRDD DFTWEVVKPLK  K
Sbjct:  265 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILNIVKETFDFRPGMISINLDLKRGGNNRFLKTAAYGHFGRDDADFTWEVVKPLKGGK 392          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.057e-58
Identity = 109/131 (83.21%), Postives = 119/131 (90.84%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAYI RQAAKSIVA+GLA RCIVQ+SYAIGVPEPLS+FVD+YGTGKIPDKEILKIVKE+ DFRPGM+ INLDL +GG+ R+LK AAYGHFGRDD DFTWE VKPLKWEKPQA
Sbjct:  267 GAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEKPQA 396          
The following BLAST results are available for this feature:
BLAST of CF834295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK4_ARATH9.503e-6087.79S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK3_PETHY9.503e-6086.15S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK_WHEAT1.621e-5983.21S-adenosylmethionine synthetase OS=Triticum aestiv... [more]
METK2_SUASA1.621e-5984.73S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK1_BETVU2.765e-5983.97S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK2_PINCO6.160e-5983.97S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]
METK_CARPA1.372e-5888.62S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK3_ATRNU1.372e-5883.97S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK_MEDFA1.792e-5886.72S-adenosylmethionine synthetase OS=Medicago falcat... [more]
METK4_ATRNU3.057e-5883.21S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834295 ID=CF834295; Name=CF834295; organism=Citrus sinensis; type=EST; length=598bp
GGAACATTAAACCAAAACCAAAAAAGACCTCGGGGAAAGAAGAAAAAGAA
AGGAATTGAATGGGGAACATGTATGAGTTCCGAACACAGGAGATTTGCTT
AGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACC
AATAGAAGCAAACTTGAACAGGAGGGATAGTTTGCACTTTTCAACTCAAA
TTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTG
AAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGGCTTCAAGAA
CCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTG
GCCTGAAATCAGAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGA
ATCTTGCCGGTTCCATATGAGTCCACAAAAAGAGACAATGGCTCAGGCAC
ACCTATGGCATACGAGACTTGGACAATGCACCTGGGAGCAAGCCCGCTTG
CAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCAGTCCTATCC
ACCTTAGGAGGGTCTTTTCCAAAGAAAGCACAGCCACCATGGGCTCCC
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