CF834295

Overview
NameCF834295
Unique NameCF834295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.057e-58
Identity = 109/131 (83.21%), Postives = 119/131 (90.84%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAYI RQAAKSIVA+GLA RCIVQ+SYAIGVPEPLS+FVD+YGTGKIPDKEILKIVKE+ DFRPGM+ INLDL +GG+ R+LK AAYGHFGRDD DFTWE VKPLKWEKPQA
Sbjct:  267 GAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEKPQA 396          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK1_ATRNU (S-adenosylmethionine synthetase 1 OS=Atriplex nummularia GN=SAMS1 PE=1 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 3.057e-58
Identity = 109/131 (83.21%), Postives = 119/131 (90.84%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAYI RQAAKSIVA+GLA RCIVQ+SYAIGVPEPLS+FVD+YGTGKIPDKEILKIVKE+ DFRPGM+ INLDL +GG+ R+LK AAYGHFGRDD DFTWE VKPLKWEKPQA
Sbjct:  267 GAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEKPQA 396          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 3.993e-58
Identity = 107/128 (83.59%), Postives = 118/128 (92.19%), Query Frame = -2
Query:  214 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEK 597
            GAHGG AF GKDP KVDR+GAYIVRQAAKSIVA+GLA RC+VQVSYAIGVPEPLS+FVDSYGTG IPDK IL+++K++ DFRPGM+TINLDLKRGGNGRF K AAYGHFGRDDPDFTWE+VKPLK EK
Sbjct:  263 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGTIPDKVILELIKKNFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEIVKPLKQEK 390          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 5.214e-58
Identity = 109/128 (85.16%), Postives = 117/128 (91.41%), Query Frame = -2
Query:  214 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEK 597
            GAHGG AF GKDP KVDR GAYIVRQAAKSIVASGLA R IVQ+  AIGVPEPLS+FVD+YGTGKIPD+EILKIVKE+ DFRPGM++INLDL RGGNGRFLK AAYGHFGR+DPDFTWEVVKPLKWEK
Sbjct:  238 GAHGGGAFSGKDPTKVDRRGAYIVRQAAKSIVASGLARRAIVQLLRAIGVPEPLSVFVDTYGTGKIPDREILKIVKETFDFRPGMISINLDLLRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWEK 365          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.214e-58
Identity = 119/179 (66.48%), Postives = 125/179 (69.83%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYG------------------------------------------------TGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAYIVRQAAKSIVASGLA RCIVQVSYAIGVPEPLS+FVDSYG                                                TGKIPD+EILKIVKE+ DFRPGM++INLDLKRGGNGRFLK AAYGHFGRDDPDFTWEVVKPLKWEKPQA
Sbjct:  263 GAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGTGKIPDREILKIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 441          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 8.894e-58
Identity = 108/131 (82.44%), Postives = 120/131 (91.60%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAYI RQAAKSI+ASGLA RCIVQ+SYAIGVPEPLS+FVDSYGTGKIPD+EILK+VKE+ DFRPGM+TINLDLK+GGN RF+K AAYGHFGRDD DFTWEVVKPLK++K  A
Sbjct:  265 GAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMITINLDLKKGGN-RFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA 394          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.981e-57
Identity = 108/131 (82.44%), Postives = 120/131 (91.60%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAYI RQAAKSI+ASGLA RCIVQ+SYAIGVPEPLS+FVDSYGTGKIPDKEILKIVKE+ DFRPGM++INLDLK+GGN RF+K AAYGHFGR+D DFTWEVVKPLK++K  A
Sbjct:  265 GAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKKGGN-RFIKTAAYGHFGREDADFTWEVVKPLKFDKASA 394          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 2.588e-57
Identity = 107/131 (81.68%), Postives = 120/131 (91.60%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAYI RQAAKSI+ASGLA RCIVQ+SYAIGVPEPLS+FVDSYGTGKIPD+EILK+VKE+ DFRPGM++INLDLK+GGN RF+K AAYGHFGRDD DFTWEVVKPLK++K  A
Sbjct:  265 GAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMISINLDLKKGGN-RFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA 394          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.284e-56
Identity = 109/131 (83.21%), Postives = 118/131 (90.08%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAY+ RQAAKSIVAS LA RCIVQVSYAIGVPEPLS+FVD+YGTGKIPDKEILKIVKE+ DFRPG++TINL LKRGG  R+LK AAYGHFGRDDPDFTWEVVKPL+ EKP A
Sbjct:  264 GAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASELARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGLITINLGLKRGGY-RYLKTAAYGHFGRDDPDFTWEVVKPLELEKPAA 393          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.284e-56
Identity = 106/131 (80.92%), Postives = 119/131 (90.84%), Query Frame = -2
Query:  205 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 597
            GAHGG AF GKDP KVDR+GAYI RQAAKSI+ASGLA RCIVQ+SYAIGVPEPLS+FVDSYGTGKIPD+EILK+VKE+ DFRPGM++INLDLK+GG  RF+K AAYGHFGRDD DFTWEVVKPLK++K  A
Sbjct:  265 GAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMISINLDLKKGGK-RFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA 394          
The following BLAST results are available for this feature:
BLAST of CF834295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_ATRNU3.057e-5883.21S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK1_ATRNU3.057e-5883.21S-adenosylmethionine synthetase 1 OS=Atriplex numm... [more]
METK3_PICSI3.993e-5883.59S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK1_PEA5.214e-5885.16S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK1_DAUCA5.214e-5866.48S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]
METK1_HORVU8.894e-5882.44S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]
METK1_TRIMO1.981e-5782.44S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK3_HORVU2.588e-5781.68S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK_MUSAC1.284e-5683.21S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK2_HORVU1.284e-5680.92S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834295 ID=CF834295; Name=CF834295; organism=Citrus sinensis; type=EST; length=598bp
GGAACATTAAACCAAAACCAAAAAAGACCTCGGGGAAAGAAGAAAAAGAA
AGGAATTGAATGGGGAACATGTATGAGTTCCGAACACAGGAGATTTGCTT
AGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACC
AATAGAAGCAAACTTGAACAGGAGGGATAGTTTGCACTTTTCAACTCAAA
TTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTG
AAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGGCTTCAAGAA
CCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTG
GCCTGAAATCAGAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGA
ATCTTGCCGGTTCCATATGAGTCCACAAAAAGAGACAATGGCTCAGGCAC
ACCTATGGCATACGAGACTTGGACAATGCACCTGGGAGCAAGCCCGCTTG
CAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCAGTCCTATCC
ACCTTAGGAGGGTCTTTTCCAAAGAAAGCACAGCCACCATGGGCTCCC
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