CF834295

Overview
NameCF834295
Unique NameCF834295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.628e-43
Identity = 88/125 (70.40%), Postives = 100/125 (80.00%), Query Frame = -2
Query:  226 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPD-FTWEVVKPL 597
            GAHGG AF GKDP KVDR+GAYI RQ AKSIVA+GLA R + Q+SYAIGV +PLS+ VD+YG+GKIPD EIL+ VKE  DFR GM+  +LDLKRGGN R+   AAYGHFGRDD D FTWE V PL
Sbjct:  262 GAHGGGAFSGKDPTKVDRSGAYIARQVAKSIVAAGLARRALFQISYAIGVAQPLSIHVDTYGSGKIPDSEILEKVKEKFDFRAGMIGKSLDLKRGGNKRYQTTAAYGHFGRDDTDVFTWEKVVPL 386          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.071e-42
Identity = 84/109 (77.06%), Postives = 96/109 (88.07%), Query Frame = -2
Query:  271 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHF 597
            GAHGG AF GKDP KVDR+GAYIVR+AAKSIVA+GLA RC+VQVSYAIGVPEPLS+FVDSYGTGKIPD+EIL IVKE+ DFRPGM++I+LDL RGGNGRF + +    F
Sbjct:  265 GAHGGGAFSGKDPTKVDRSGAYIVREAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGKIPDREILNIVKEAFDFRPGMISISLDLLRGGNGRFFEDSCIWTF 373          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.289e-36
Identity = 78/125 (62.40%), Postives = 92/125 (73.60%), Query Frame = -2
Query:  223 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLK 597
            GAHGG AF GKD  KVDR+GAY  R  AKS+VA+GLA RC+VQVSY+IGV +PLS+FVD+YGTGK  D EIL I+  + D RPG +  +L L R     F K A+ GHFGR+DPDFTWE VK LK
Sbjct:  262 GAHGGGAFSGKDATKVDRSGAYAARWIAKSLVAAGLADRCLVQVSYSIGVAKPLSVFVDTYGTGKKTDAEILAIIDNNFDLRPGCLMRDLQLTR---PIFQKTASGGHFGRNDPDFTWETVKELK 383          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_GEOSM (S-adenosylmethionine synthetase OS=Geobacter sp. (strain M21) GN=metK PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 8.383e-32
Identity = 71/119 (59.66%), Postives = 85/119 (71.43%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            GAHGG AF GKDP KVDR+ AY+ R  AK++VASG+  RC VQV+YAIGV EP+S+ VD  GTGKIP K I +IV+E  D RP  +   LDL R     + K AAYGHFGR+ P+FTWE
Sbjct:  260 GAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVASGVCERCEVQVAYAIGVAEPVSVMVDCNGTGKIPSKRISEIVREVFDMRPRAIIEQLDLLR---PIYRKTAAYGHFGRELPEFTWE 375          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_CELJU (S-adenosylmethionine synthetase OS=Cellvibrio japonicus (strain Ueda107) GN=metK PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 8.383e-32
Identity = 68/117 (58.12%), Postives = 87/117 (74.36%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ ++++GTGK+PD EI+K+V+E  D RP  +   L+LKR     + + AAYGHFGR+ PDFTWE
Sbjct:  259 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTGKLPDAEIIKLVREHFDLRPRGLIEMLNLKR---PIYRQTAAYGHFGRELPDFTWE 372          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_THIDA (S-adenosylmethionine synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metK PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.095e-31
Identity = 67/118 (56.78%), Postives = 88/118 (74.58%), Query Frame = -2
Query:  238 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEV 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C+VQVSYAIGV +P SL VD++GTGKIP+ +I+++++   D RP  +   LDL R     + + A+YGHFGRD+P+FTWEV
Sbjct:  261 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCMVQVSYAIGVAKPTSLMVDTFGTGKIPEAKIVELIQAHFDLRPKGIVNMLDLLR---PIYTRTASYGHFGRDEPEFTWEV 375          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_SYNWW (S-adenosylmethionine synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=metK PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.095e-31
Identity = 65/117 (55.56%), Postives = 90/117 (76.92%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ +Y++R  AK+IVA+GLA RC +QV+YAIGV  PLS+ V+++GTGKI D +I++++K++ D RP  +  +LDL+R     + K AAYGHFGR+D +FTWE
Sbjct:  269 HGGGAFSGKDPTKVDRSASYMLRYVAKNIVAAGLAERCEIQVAYAIGVANPLSINVNTFGTGKISDDKIIELIKKNFDLRPAAIIRDLDLRR---PIYRKTAAYGHFGREDAEFTWE 382          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_DECAR (S-adenosylmethionine synthetase OS=Dechloromonas aromatica (strain RCB) GN=metK PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.868e-31
Identity = 67/117 (57.26%), Postives = 85/117 (72.65%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA RC+VQVSYAIGV EP S+ V++YGTGK+ ++ +  +V++  D RP  +   LDL R     + K AAYGHFGRD+P+FTWE
Sbjct:  260 HGGGAFSGKDPSKVDRSAAYATRYVAKNIVAAGLASRCLVQVSYAIGVAEPTSIMVETYGTGKVSNETLTALVRKHFDLRPKGIVNMLDLLR---PIYQKTAAYGHFGRDEPEFTWE 373          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_GEOSL (S-adenosylmethionine synthetase OS=Geobacter sulfurreducens GN=metK PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.439e-31
Identity = 69/119 (57.98%), Postives = 85/119 (71.43%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            GAHGG AF GKDP KVDR+ AY+ R  AK++VA+GL  RC VQV+YAIGV EP+S+ VD+ GTGKIP   I +I++E  D RP  +   LDL R     + K AAYGHFGR+ P+FTWE
Sbjct:  260 GAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCERCEVQVAYAIGVAEPVSVMVDTAGTGKIPSARIAEIIREVFDLRPRAIIEQLDLLR---PIYRKTAAYGHFGRELPEFTWE 375          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_NITMU (S-adenosylmethionine synthetase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=metK PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.186e-31
Identity = 66/117 (56.41%), Postives = 86/117 (73.50%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK++VA+G+A RC VQ++YAIGV  P+SL VD++GTGKIPD +I+K+++   D RP  +   LDL R     + K AAYGHFGRD+P+F+WE
Sbjct:  260 HGGGAFSGKDPSKVDRSAAYAGRYVAKNLVAAGIASRCEVQMAYAIGVARPVSLMVDTFGTGKIPDDKIVKLIERHFDLRPRGIIHGLDLLR---PIYEKTAAYGHFGRDEPEFSWE 373          
The following BLAST results are available for this feature:
BLAST of CF834295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_OSTTA3.628e-4370.40S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK2_PEA3.071e-4277.06S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK_DICDI3.289e-3662.40S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_GEOSM8.383e-3259.66S-adenosylmethionine synthetase OS=Geobacter sp. (... [more]
METK_CELJU8.383e-3258.12S-adenosylmethionine synthetase OS=Cellvibrio japo... [more]
METK_THIDA1.095e-3156.78S-adenosylmethionine synthetase OS=Thiobacillus de... [more]
METK_SYNWW1.095e-3155.56S-adenosylmethionine synthetase OS=Syntrophomonas ... [more]
METK_DECAR1.868e-3157.26S-adenosylmethionine synthetase OS=Dechloromonas a... [more]
METK_GEOSL2.439e-3157.98S-adenosylmethionine synthetase OS=Geobacter sulfu... [more]
METK_NITMU3.186e-3156.41S-adenosylmethionine synthetase OS=Nitrosospira mu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834295 ID=CF834295; Name=CF834295; organism=Citrus sinensis; type=EST; length=598bp
GGAACATTAAACCAAAACCAAAAAAGACCTCGGGGAAAGAAGAAAAAGAA
AGGAATTGAATGGGGAACATGTATGAGTTCCGAACACAGGAGATTTGCTT
AGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACC
AATAGAAGCAAACTTGAACAGGAGGGATAGTTTGCACTTTTCAACTCAAA
TTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTG
AAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGGCTTCAAGAA
CCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTG
GCCTGAAATCAGAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGA
ATCTTGCCGGTTCCATATGAGTCCACAAAAAGAGACAATGGCTCAGGCAC
ACCTATGGCATACGAGACTTGGACAATGCACCTGGGAGCAAGCCCGCTTG
CAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCAGTCCTATCC
ACCTTAGGAGGGTCTTTTCCAAAGAAAGCACAGCCACCATGGGCTCCC
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