CF834295

Overview
NameCF834295
Unique NameCF834295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_MAGSM (S-adenosylmethionine synthetase OS=Magnetococcus sp. (strain MC-1) GN=metK PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.186e-31
Identity = 66/119 (55.46%), Postives = 88/119 (73.95%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            G+HGG AF GKDP KVDR+ AY+ R  AK+IVA+GLA +C +QV+YAIGV +P+S+ VD++GTGK+ D+ I ++VK+  D RP  +   LDL R     + K AAYGHFGR+ P+FTWE
Sbjct:  260 GSHGGGAFSGKDPSKVDRSSAYMGRYVAKNIVAAGLAEKCEIQVAYAIGVSQPMSVMVDTFGTGKLDDEAITELVKKHFDLRPKAIVQQLDLLR---PIYKKSAAYGHFGRELPEFTWE 375          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.186e-31
Identity = 73/128 (57.03%), Postives = 88/128 (68.75%), Query Frame = -2
Query:  220 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGT--GKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKW 597
            GAHGG AF GKDP KVDR+ AY  R  AKS+VA GLA R +VQVSYAIGV  PLS+FVDSYGT  G   D+++L I K + D RPG +  +L L+R     + K A +GHFGR+DPDF WE  K L +
Sbjct:  264 GAHGGGAFSGKDPSKVDRSAAYAARWIAKSLVARGLANRALVQVSYAIGVSHPLSVFVDSYGTAQGGRTDEDLLAISKSNFDLRPGKIINDLQLRR---PIYEKTAYHGHFGRNDPDFLWEAPKKLNF 388          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_GEOUR (S-adenosylmethionine synthetase OS=Geobacter uraniireducens (strain Rf4) GN=metK PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.160e-31
Identity = 69/119 (57.98%), Postives = 85/119 (71.43%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            GAHGG AF GKDP KVDR+ AY+ R  AK++VA+GL  +C VQV+YAIGV EP+S+ VD+ GTGKIP   I +IV+E  D RP  +   LDL R     + K AAYGHFGR+ P+FTWE
Sbjct:  260 GAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCEKCEVQVAYAIGVAEPVSVMVDTSGTGKIPSARIAQIVREVFDLRPRAIIEQLDLLR---PIYKKTAAYGHFGRELPEFTWE 375          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_TERTT (S-adenosylmethionine synthetase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=metK PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.434e-31
Identity = 69/118 (58.47%), Postives = 86/118 (72.88%), Query Frame = -2
Query:  238 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEV 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GTGKI D +I+++VKE  D RP  +   LDL R     + K AAYGHFGR+ P+FTWE+
Sbjct:  259 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISVNTFGTGKIDDGKIVELVKEHFDLRPRGLIEMLDLMR---PIYRKTAAYGHFGRELPEFTWEI 373          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_SYNFM (S-adenosylmethionine synthetase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=metK PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.434e-31
Identity = 68/128 (53.12%), Postives = 90/128 (70.31%), Query Frame = -2
Query:  223 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE---VVKPLK 597
            G+HGG  F GKDP KVDRT +Y+ R  AK+IVA+G+A +  VQV+Y+IGV EP+SL +D++GTGKIP   I +IV++   F+P  M   L L R     F K A YGHFGR+DPDFTWE   +V+P++
Sbjct:  260 GSHGGGCFSGKDPSKVDRTASYMARYVAKNIVAAGVADKVEVQVAYSIGVAEPVSLMIDTFGTGKIPSDRIAEIVRKLFSFKPANMIKQLRLLR---PIFKKTACYGHFGRNDPDFTWEKTDMVEPIR 384          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_GEOMG (S-adenosylmethionine synthetase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=metK PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.097e-31
Identity = 69/119 (57.98%), Postives = 85/119 (71.43%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            GAHGG AF GKDP KVDR+ AY+ R  AK++VA+GL  +C VQV+YAIGV EP+S+ VD+ GTGKI  K I +IV+E  D RP  +   LDL R     + K AAYGHFGR+ P+FTWE
Sbjct:  260 GAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCEKCEVQVAYAIGVAEPVSVMVDTAGTGKISSKRIAEIVREVFDLRPRAIIEQLDLLR---PIYRKTAAYGHFGRELPEFTWE 375          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_SYMTH (S-adenosylmethionine synthetase OS=Symbiobacterium thermophilum GN=metK PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 9.269e-31
Identity = 65/117 (55.56%), Postives = 86/117 (73.50%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+GAY  R  AK+IVA+GLA +C VQV+YAIGV  P+S+ V ++GTGK+PD+ + ++V+E+ D RPG +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  271 HGGGAFSGKDPTKVDRSGAYAARWVAKNIVAAGLARKCEVQVAYAIGVAHPVSILVTTFGTGKLPDERLAQLVRETFDLRPGAIIRDLDLRR---PIYRQVAAYGHFGRPDLDLPWE 384          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_FRAP2 (S-adenosylmethionine synthetase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=metK PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 9.269e-31
Identity = 67/119 (56.30%), Postives = 88/119 (73.95%), Query Frame = -2
Query:  235 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVV 591
            HGG AF GKDP KVDR+GAY+ R  AK++VA+GLA +C VQV+YAIGV +P+SL V+++GTGKI D +I K+V E+ D R G +  NLDL R     + K + YGHFGR+ P+FTWE +
Sbjct:  259 HGGGAFSGKDPSKVDRSGAYMGRYIAKNVVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKISDSKIEKLVSETFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_NEIMF (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=metK PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.211e-30
Identity = 65/117 (55.56%), Postives = 86/117 (73.50%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ +D++GTGKI +++++ +V+E  D RP  +   LDL R     + K AAYGHFGR++P+FTWE
Sbjct:  262 HGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLVREHFDLRPKGIVQMLDLLR---PIYSKSAAYGHFGREEPEFTWE 375          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_NEIMB (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup B GN=metK PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.211e-30
Identity = 65/117 (55.56%), Postives = 86/117 (73.50%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ +D++GTGKI +++++ +V+E  D RP  +   LDL R     + K AAYGHFGR++P+FTWE
Sbjct:  262 HGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLIALVREHFDLRPKGIVQMLDLLR---PIYSKSAAYGHFGREEPEFTWE 375          
The following BLAST results are available for this feature:
BLAST of CF834295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MAGSM3.186e-3155.46S-adenosylmethionine synthetase OS=Magnetococcus s... [more]
METK_ACACA3.186e-3157.03S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK_GEOUR4.160e-3157.98S-adenosylmethionine synthetase OS=Geobacter urani... [more]
METK_TERTT5.434e-3158.47S-adenosylmethionine synthetase OS=Teredinibacter ... [more]
METK_SYNFM5.434e-3153.13S-adenosylmethionine synthetase OS=Syntrophobacter... [more]
METK_GEOMG7.097e-3157.98S-adenosylmethionine synthetase OS=Geobacter metal... [more]
METK_SYMTH9.269e-3155.56S-adenosylmethionine synthetase OS=Symbiobacterium... [more]
METK_FRAP29.269e-3156.30S-adenosylmethionine synthetase OS=Francisella phi... [more]
METK_NEIMF1.211e-3055.56S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_NEIMB1.211e-3055.56S-adenosylmethionine synthetase OS=Neisseria menin... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834295 ID=CF834295; Name=CF834295; organism=Citrus sinensis; type=EST; length=598bp
GGAACATTAAACCAAAACCAAAAAAGACCTCGGGGAAAGAAGAAAAAGAA
AGGAATTGAATGGGGAACATGTATGAGTTCCGAACACAGGAGATTTGCTT
AGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACC
AATAGAAGCAAACTTGAACAGGAGGGATAGTTTGCACTTTTCAACTCAAA
TTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTG
AAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGGCTTCAAGAA
CCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTG
GCCTGAAATCAGAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGA
ATCTTGCCGGTTCCATATGAGTCCACAAAAAGAGACAATGGCTCAGGCAC
ACCTATGGCATACGAGACTTGGACAATGCACCTGGGAGCAAGCCCGCTTG
CAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCAGTCCTATCC
ACCTTAGGAGGGTCTTTTCCAAAGAAAGCACAGCCACCATGGGCTCCC
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