CF834357

Overview
NameCF834357
Unique NameCF834357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSK4_ARATH (Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.134e-37
Identity = 84/167 (50.30%), Postives = 108/167 (64.67%), Query Frame = -1
Query:  275 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAESM 775
            AN KIH+ETTGPEIW+ T G +D  V+           G +LK  N +IK+ GVEP E +V+SG  PG          ++PG+LDV LLDE  ++S+ EAIE A+ LAL+EGLLVGISSG         AKR ENAGKLI V+FPS GERY+++ LF S+ +E + M
Sbjct:  246 ANTKIHFETTGPEIWEDTMGNVDIFVAGIGTGGTVTGTGGFLKMMNKDIKVVGVEPSERSVISGDNPG----------YLPGILDVKLLDEVFKVSNGEAIEMARRLALEEGLLVGISSGAAAVAAVSLAKRAENAGKLITVLFPSHGERYITTALFSSINREVQEM 402          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSK_HAEIN (Cysteine synthase OS=Haemophilus influenzae GN=cysK PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.766e-34
Identity = 81/168 (48.21%), Postives = 104/168 (61.90%), Query Frame = -1
Query:  293 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLK-EHNPEIKLYGVEPVESAVLSGG------KPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVK 775
            ANP+IH ETTGPEIWK T GK+D +V+            + +K +   +I    VEPVES V+S        KPGPHKIQGIGAGFIP  LD++++D    + S+ A+ TA+ L  +EG+L GISSG         AK PE A KLIVV+ PS  ERYLS+ LFE ++
Sbjct:  148 ANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQGIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAADRLAKLPEFADKLIVVILPSASERYLSTALFEGIE 315          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: SRPG_SYNE7 (Cysteine synthase, plasmid OS=Synechococcus elongatus (strain PCC 7942) GN=srpG PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.391e-34
Identity = 83/170 (48.82%), Postives = 105/170 (61.76%), Query Frame = -1
Query:  287 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKE-HNPEIKLYGVEPVESAVLSGG------KPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKE 775
            ANP IH +TTGPEIW+ TGG ID LVS            +Y+K+     I    VEP  S V+S        KPGPHKIQGIGAGFIP  LD++L+D+  ++S+EEAI  A+ LA +EGL+ GIS G         A++ E+AGK IVVV P  GERYLS+ LF+ +  E
Sbjct:  154 ANPAIHEQTTGPEIWEDTGGAIDILVSGVGTGGTITGVSRYIKQTQGKPILSVAVEPEASPVISQQRSGLPLKPGPHKIQGIGAGFIPENLDLSLVDQVERVSNEEAIAYARRLAQEEGLISGISCGAAVAAAVRLAQQSEHAGKTIVVVLPDSGERYLSTALFDGIFNE 323          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSK_SALTY (Cysteine synthase A OS=Salmonella typhimurium GN=cysK PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.525e-32
Identity = 77/173 (44.51%), Postives = 103/173 (59.54%), Query Frame = -1
Query:  281 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLK--EHNPEIKLYGVEPVESAVLSGG------KPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAE 775
            ANP+IH +TTGPEIW+ T G++D  +S            +Y+K  +   ++    VEP +S V++        KPGPHKIQGIGAGFIPG LD+ L+D+ V I++EEAI TA+ L  +EG+L GISSG          +      K IVV+ PS GERYLS+ LF  +  E E
Sbjct:  148 ANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 320          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSK_SALTI (Cysteine synthase A OS=Salmonella typhi GN=cysK PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.525e-32
Identity = 77/173 (44.51%), Postives = 103/173 (59.54%), Query Frame = -1
Query:  281 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLK--EHNPEIKLYGVEPVESAVLSGG------KPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAE 775
            ANP+IH +TTGPEIW+ T G++D  +S            +Y+K  +   ++    VEP +S V++        KPGPHKIQGIGAGFIPG LD+ L+D+ V I++EEAI TA+ L  +EG+L GISSG          +      K IVV+ PS GERYLS+ LF  +  E E
Sbjct:  148 ANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 320          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSK_BUCAP (Cysteine synthase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cysK PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.604e-32
Identity = 86/172 (50.00%), Postives = 103/172 (59.88%), Query Frame = -1
Query:  287 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLK--EHNPEIKLYGVEPVESAV----LSGGK--PGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLF-ESVKKE 775
            ANP+IH +TTGPEIWK T G ID L+S            KY+K  E   ++    VEP+ES V    LSG K  PG HKIQGIGAGFIP  LD++L+D  + +SSEEAI  AK +  KEG+L GISSG          K  +   K IVV+ PS GERYLS+ LF  S K E
Sbjct:  148 ANPEIHQKTTGPEIWKDTKGNIDILISGVGTGGTITGITKYIKIKEGKKDLISVAVEPLESPVITQFLSGKKIKPGLHKIQGIGAGFIPKNLDLSLIDRIITVSSEEAIFNAKKIMKKEGILSGISSGAAIAAALKIQKENDFKNKNIVVILPSSGERYLSTELFSRSFKNE 319          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSK_BUCAI (Cysteine synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cysK PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.091e-31
Identity = 78/168 (46.43%), Postives = 101/168 (60.12%), Query Frame = -1
Query:  296 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYG--VEPVESAVLS---GGK---PGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESV 775
            ANP+IH  TTGPEIW  T G +D L+S            +Y+K+   +  L    VEP ES V++    GK   PGPHKIQGIG GFIP  LD+ ++D+ + +SSEEAI TAK L  KEG+L GISSG          ++ + + K IVV+ PS GERYLS+ LF  +
Sbjct:  148 ANPEIHQITTGPEIWNDTNGNLDILISAVGTGGTITGITRYIKKIKRKKNLISIAVEPSESPVITQFLAGKAIEPGPHKIQGIGPGFIPKNLDLTIIDQVITVSSEEAILTAKELMKKEGILAGISSGAALYAAIKIQQQKKFSDKKIVVILPSSGERYLSTELFSEL 315          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSK_ECOLI (Cysteine synthase A OS=Escherichia coli (strain K12) GN=cysK PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 8.683e-31
Identity = 75/173 (43.35%), Postives = 101/173 (58.38%), Query Frame = -1
Query:  281 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGV--EPVESAVLSGG------KPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAE 775
            ANP+IH +TTGPEIW+ T G++D  ++            +Y+K    +  L  V  EP +S V++        KPGPHKIQGIGAGFIP  LD+ L+D+ + I++EEAI TA+ L  +EG+L GISSG          +      K IVV+ PS GERYLS+ LF  +  E E
Sbjct:  148 ANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 320          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSK_ECO57 (Cysteine synthase A OS=Escherichia coli O157:H7 GN=cysK PE=3 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 8.683e-31
Identity = 75/173 (43.35%), Postives = 101/173 (58.38%), Query Frame = -1
Query:  281 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGV--EPVESAVLSGG------KPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAE 775
            ANP+IH +TTGPEIW+ T G++D  ++            +Y+K    +  L  V  EP +S V++        KPGPHKIQGIGAGFIP  LD+ L+D+ + I++EEAI TA+ L  +EG+L GISSG          +      K IVV+ PS GERYLS+ LF  +  E E
Sbjct:  148 ANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 320          
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CYSK_BACSU (Cysteine synthase OS=Bacillus subtilis GN=cysK PE=1 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 1.134e-30
Identity = 75/159 (47.17%), Postives = 101/159 (63.52%), Query Frame = -1
Query:  302 ANPKIHYETTGPEIWKGTGG-KIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFE 775
            +NP+IH +TTG EI +  G  ++DA V+           G+ LKE  P IK+Y VEP +S VLSGGKPGPHKIQGIGAGF+P +L+  + DE   + +EEA E A+  A +EG+L GISSG         AK+    GK ++ + PS GERYLS+ L++
Sbjct:  149 SNPEIHRQTTGKEIVEQFGDDQLDAFVAGIGTGGTITGAGEVLKEAYPSIKIYAVEPSDSPVLSGGKPGPHKIQGIGAGFVPDILNTEVYDEIFPVKNEEAFEYARRAAREEGILGGISSGAAIYAALQVAKK-LGKGKKVLAIIPSNGERYLSTPLYQ 306          
The following BLAST results are available for this feature:
BLAST of CF834357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CYSK4_ARATH2.134e-3750.30Probable cysteine synthase, chloroplastic OS=Arabi... [more]
CYSK_HAEIN3.766e-3448.21Cysteine synthase OS=Haemophilus influenzae GN=cys... [more]
SRPG_SYNE78.391e-3448.82Cysteine synthase, plasmid OS=Synechococcus elonga... [more]
CYSK_SALTY3.525e-3244.51Cysteine synthase A OS=Salmonella typhimurium GN=c... [more]
CYSK_SALTI3.525e-3244.51Cysteine synthase A OS=Salmonella typhi GN=cysK PE... [more]
CYSK_BUCAP4.604e-3250.00Cysteine synthase OS=Buchnera aphidicola subsp. Sc... [more]
CYSK_BUCAI5.091e-3146.43Cysteine synthase OS=Buchnera aphidicola subsp. Ac... [more]
CYSK_ECOLI8.683e-3143.35Cysteine synthase A OS=Escherichia coli (strain K1... [more]
CYSK_ECO578.683e-3143.35Cysteine synthase A OS=Escherichia coli O157:H7 GN... [more]
CYSK_BACSU1.134e-3047.17Cysteine synthase OS=Bacillus subtilis GN=cysK PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05G09_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834357 ID=CF834357; Name=CF834357; organism=Citrus sinensis; type=EST; length=775bp
CTCTACAACACCTACTTCCAAACTTTCCTTAATCTCAAGCACAGCATAGA
CTACAGAACTTTAACCCCTATGAGTTTCCACAGATTTTTACACAAACAGT
GAAACCTCCTCCAGAGGGTAAGGAATTGCAAAGATTTGTAGTTGTTTATA
AGAAAACATGAAGAAGCCAAAGCATCCAACCAAAATGAAATTCTGACTAG
AAAAGCAAGTTAGTCCCCACAGAATACGGGACTGGTGACTCAAAAGGTTT
GGGCATATCTCACGGCTCAAACACCATGCTCTCTGCCTCCTTTTTCACAG
ATTCAAATAAAACAGAAGAGAGGTATCGCTCTCCGAAGCTGGGGAAGACC
ACCACAATGAGTTTTCCAGCATTTTCTGGCCTCTTTGCTATCCGAATTGC
AGCTGCAGTAGCAGCTCCGGATGATATCCCAACCAACAATCCTTCTTTAA
GTGCAAGAAGCTTCGCAGTCTCAATAGCTTCTTCACTTGATATTTGAACA
GTTTCATCTAGTAAATTGACGTCCAAAACTCCAGGGATGAAGCCAGCACC
TATTCCTTGGATCTTATGGGGACCAGGTTTCCCTCCAGACAGCACAGCAC
TTTCAACTGGTTCAACGCCATAGAGCTTAATTTCAGGATTATGCTCTTTG
AGATACTTCCCTGCACCAGTGACAGTACCACCAGTCCCTATACCAGAAAC
AAGGGCATCAATCTTACCACCGGTGCCTTTCCAGATCTCTGGTCCGGTAG
TCTCGTAGTGGATCTTTGGGTTTGC
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