CF834357

Overview
NameCF834357
Unique NameCF834357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CBS_MACFA (Cystathionine beta-synthase OS=Macaca fascicularis GN=CBS PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 7.385e-14
Identity = 51/161 (31.68%), Postives = 81/161 (50.31%), Query Frame = -1 
Query:  308 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEP-----VESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVL 775
            +NP  HY+TT  EI +   GK+D LV+            + LKE  P  ++ GV+P      E   L+  +   ++++GIG  FIP VLD  ++D+  + + EEA   A++L  +EGLL G S+G         A+  +  G+  VV+ P     Y++  L
Sbjct:  227 SNPLAHYDTTADEILRQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTMAVAVKAAQELQE-GQRCVVILPDSVRNYMTKFL 386
[Close]
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CBS_HUMAN (Cystathionine beta-synthase OS=Homo sapiens GN=CBS PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.645e-14
Identity = 51/161 (31.68%), Postives = 81/161 (50.31%), Query Frame = -1 
Query:  308 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEP-----VESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVL 775
            +NP  HY+TT  EI +   GK+D LV+            + LKE  P  ++ GV+P      E   L+  +   ++++GIG  FIP VLD  ++D+  + + EEA   A++L  +EGLL G S+G         A+  +  G+  VV+ P     Y++  L
Sbjct:  227 SNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQELQE-GQRCVVILPDSVRNYMTKFL 386
[Close]
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CBS_RABIT (Cystathionine beta-synthase OS=Oryctolagus cuniculus GN=CBS PE=2 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.806e-13
Identity = 51/161 (31.68%), Postives = 80/161 (49.69%), Query Frame = -1 
Query:  308 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEP-----VESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVL 775
            +NP  HY+TT  EI +   GK+D LV+            + LKE  P  ++ GV+P      E   L+  +   ++++GIG  FIP VLD  ++D   + + +EA   A++L  +EGLL G S+G         A+  +  G+  VV+ P     Y+S  L
Sbjct:  227 SNPLAHYDTTAEEILQQCDGKLDMLVASAGTGGTITGIARKLKEKCPGCQIIGVDPEGSILAEPEELNQTEVTAYEVEGIGYDFIPTVLDRTVVDRWFKSTDKEAFAFARMLIAQEGLLCGGSAGSAVAVAVKAAQELQE-GQRCVVILPDSVRNYMSKFL 386
[Close]
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CBS_MOUSE (Cystathionine beta-synthase OS=Mus musculus GN=Cbs PE=2 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.806e-13
Identity = 51/161 (31.68%), Postives = 80/161 (49.69%), Query Frame = -1 
Query:  308 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEP-----VESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVL 775
            +NP  HY+ T  EI +   GK+D LV+            + LKE  P  K+ GV+P      E   L+  +   ++++GIG  FIP VLD  ++D+  + + E++   A++L  +EGLL G SSG         A+  +  G+  VV+ P     Y+S  L
Sbjct:  224 SNPLAHYDDTAEEILQQCDGKLDMLVASAGTGGTITGIARKLKEKCPGCKIIGVDPEGSILAEPEELNQTEQTAYEVEGIGYDFIPTVLDRAVVDKWFKSNDEDSFAFARMLIAQEGLLCGGSSGSAMAVAVKAARELQE-GQRCVVILPDSVRNYMSKFL 383
[Close]
BLAST of CF834357 vs. ExPASy Swiss-Prot
Match: CBS_RAT (Cystathionine beta-synthase OS=Rattus norvegicus GN=Cbs PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.393e-12
Identity = 50/161 (31.06%), Postives = 79/161 (49.07%), Query Frame = -1 
Query:  308 ANPKIHYETTGPEIWKGTGGKIDALVSXXXXXXXXXXXGKYLKEHNPEIKLYGVEP-----VESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVL 775
            +NP  HY+ T  EI +   GK+D LV+            + LKE  P  K+ GV+P      E   L+  +   ++++GIG  FIP VLD  ++D   + + +++   A++L  +EGLL G SSG         A+  +  G+  VV+ P     Y+S  L
Sbjct:  224 SNPLAHYDDTAEEILQQCDGKVDMLVASAGTGGTITGIARKLKEKCPGCKIIGVDPEGSILAEPEELNQTEQTAYEVEGIGYDFIPTVLDRAVVDRWFKSNDDDSFAFARMLISQEGLLCGGSSGSAMAVAVKAAQELKE-GQRCVVILPDSVRNYMSKFL 383
The following BLAST results are available for this feature:
BLAST of CF834357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CBS_MACFA7.385e-1431.68Cystathionine beta-synthase OS=Macaca fascicularis... [more]
CBS_HUMAN9.645e-1431.68Cystathionine beta-synthase OS=Homo sapiens GN=CBS... [more]
CBS_RABIT2.806e-1331.68Cystathionine beta-synthase OS=Oryctolagus cunicul... [more]
CBS_MOUSE2.806e-1331.68Cystathionine beta-synthase OS=Mus musculus GN=Cbs... [more]
CBS_RAT1.393e-1231.06Cystathionine beta-synthase OS=Rattus norvegicus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05G09_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834357 ID=CF834357; Name=CF834357; organism=Citrus sinensis; type=EST; length=775bp
CTCTACAACACCTACTTCCAAACTTTCCTTAATCTCAAGCACAGCATAGA
CTACAGAACTTTAACCCCTATGAGTTTCCACAGATTTTTACACAAACAGT
GAAACCTCCTCCAGAGGGTAAGGAATTGCAAAGATTTGTAGTTGTTTATA
AGAAAACATGAAGAAGCCAAAGCATCCAACCAAAATGAAATTCTGACTAG
AAAAGCAAGTTAGTCCCCACAGAATACGGGACTGGTGACTCAAAAGGTTT
GGGCATATCTCACGGCTCAAACACCATGCTCTCTGCCTCCTTTTTCACAG
ATTCAAATAAAACAGAAGAGAGGTATCGCTCTCCGAAGCTGGGGAAGACC
ACCACAATGAGTTTTCCAGCATTTTCTGGCCTCTTTGCTATCCGAATTGC
AGCTGCAGTAGCAGCTCCGGATGATATCCCAACCAACAATCCTTCTTTAA
GTGCAAGAAGCTTCGCAGTCTCAATAGCTTCTTCACTTGATATTTGAACA
GTTTCATCTAGTAAATTGACGTCCAAAACTCCAGGGATGAAGCCAGCACC
TATTCCTTGGATCTTATGGGGACCAGGTTTCCCTCCAGACAGCACAGCAC
TTTCAACTGGTTCAACGCCATAGAGCTTAATTTCAGGATTATGCTCTTTG
AGATACTTCCCTGCACCAGTGACAGTACCACCAGTCCCTATACCAGAAAC
AAGGGCATCAATCTTACCACCGGTGCCTTTCCAGATCTCTGGTCCGGTAG
TCTCGTAGTGGATCTTTGGGTTTGC
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