CF834358
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_RICPU (30S ribosomal protein S9 OS=Rickettsia peacockii (strain Rustic) GN=rpsI PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.913e-31 Identity = 68/127 (53.54%), Postives = 85/127 (66.93%), Query Frame = -2 Query: 287 GRVYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 667 G+ Y TG+RK +IARVW++ G GK +VN K YFP + +L PF TKT+ +D+ CTV+GGG+SGQ GA+ GIS+AL PD LR G LTRDSRVVERKK G+ KARK Q+ KR Sbjct: 33 GKFYATGKRKNAIARVWLKVGKGKIVVNKKTIAQYFPSETYVKTILQPFVLTKTIDQYDIICTVRGGGISGQKGAILHGISKALDKSAPDFHAILRKGGLLTRDSRVVERKKYGQRKARKKTQFSKR 159
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_RICM5 (30S ribosomal protein S9 OS=Rickettsia massiliae (strain Mtu5) GN=rpsI PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.913e-31 Identity = 69/127 (54.33%), Postives = 85/127 (66.93%), Query Frame = -2 Query: 287 GRVYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 667 G+ Y TG+RK +IARVW++ G GK +VN K YFP + +L PF TKT+ +DV CTV+GGG+SGQ GA+ GIS+AL PD LR G LTRDSRVVERKK G+ KARK Q+ KR Sbjct: 33 GKFYATGKRKNAIARVWLKVGKGKIVVNKKTIAQYFPSETYVKTILQPFVLTKTIDQYDVICTVRGGGISGQKGAILHGISKALDKSAPDFHVILRKGGLLTRDSRVVERKKYGQRKARKKTQFSKR 159
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_RICAE (30S ribosomal protein S9 OS=Rickettsia africae (strain ESF-5) GN=rpsI PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.913e-31 Identity = 68/127 (53.54%), Postives = 85/127 (66.93%), Query Frame = -2 Query: 287 GRVYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 667 G+ Y TG+RK +IARVW++ G GK +VN K YFP + +L PF TKT+ +D+ CTV+GGG+SGQ GA+ GIS+AL PD LR G LTRDSRVVERKK G+ KARK Q+ KR Sbjct: 33 GKFYATGKRKNAIARVWLKVGKGKIVVNKKTIAQYFPSETYVKTILKPFVLTKTIDQYDIICTVRGGGISGQKGAILHGISKALDKSAPDFHAILRKGGLLTRDSRVVERKKYGQRKARKKTQFSKR 159
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_RICCK (30S ribosomal protein S9 OS=Rickettsia canadensis (strain McKiel) GN=rpsI PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.487e-30 Identity = 68/126 (53.97%), Postives = 84/126 (66.67%), Query Frame = -2 Query: 287 RVYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 664 + Y TG+RK +IARVW++ G GK +VN K D YF + +L PF TKT+ +DV CTV+GGG+SGQ GA+ GIS+AL PD LR G LTRDSRVVERKK G+ KARK Q+ KR Sbjct: 36 KFYATGKRKNAIARVWLKVGKGKIVVNKKTIDQYFSSETYVKTILQPFVLTKTIDQYDVICTVRGGGISGQKGAILHGISKALDKSAPDFHAMLRKGGLLTRDSRVVERKKYGQRKARKKTQFSKR 161
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_METEP (30S ribosomal protein S9 OS=Methylobacterium extorquens (strain PA1) GN=rpsI PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.487e-30 Identity = 67/127 (52.76%), Postives = 88/127 (69.29%), Query Frame = -2 Query: 287 GRVYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 667 GR Y TG+RK ++ARVWI+PG+G +VN + + YF R L P + +D+ TVKGGG+SGQ GAVR G+S+AL +EP+LR +L+ GFLTRD RVVERKK G+ KAR+SFQ+ KR Sbjct: 35 GRAYATGKRKDAVARVWIKPGNGTVVVNGRPVETYFARPVLRMILRQPLEIVSRVDQYDITVTVKGGGLSGQAGAVRHGLSKALTYYEPELRSSLKREGFLTRDPRVVERKKYGRKKARRSFQFSKR 161
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_METC4 (30S ribosomal protein S9 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=rpsI PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.487e-30 Identity = 67/127 (52.76%), Postives = 88/127 (69.29%), Query Frame = -2 Query: 287 GRVYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 667 GR Y TG+RK ++ARVWI+PG+G +VN + + YF R L P + +D+ TVKGGG+SGQ GAVR G+S+AL +EP+LR +L+ GFLTRD RVVERKK G+ KAR+SFQ+ KR Sbjct: 35 GRAYATGKRKDAVARVWIKPGNGTVVVNGRPVETYFARPVLRMILRQPLEIVSRVDQYDITVTVKGGGLSGQAGAVRHGLSKALTYYEPELRSSLKREGFLTRDPRVVERKKYGRKKARRSFQFSKR 161
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_CLOTH (30S ribosomal protein S9 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=rpsI PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.487e-30 Identity = 69/124 (55.65%), Postives = 88/124 (70.97%), Query Frame = -2 Query: 287 YGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 658 YGTGRRK S+ARV + PGDGK I+N++E D YF + + + P T TLG +DV C V GGG +GQ GA+R GISRAL ++ +LRPAL+ AGFLTRD R+ ERKK G KAR++ Q+ KR Sbjct: 7 YGTGRRKKSVARVRLVPGDGKIIINERELDDYFGLETLKTIVKQPLVLTDTLGKFDVLCKVAGGGYTGQAGAIRHGISRALLKFDEELRPALKKAGFLTRDPRMKERKKYGLKKARRAPQFSKR 130
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_RICPR (30S ribosomal protein S9 OS=Rickettsia prowazekii GN=rpsI PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.536e-30 Identity = 68/126 (53.97%), Postives = 85/126 (67.46%), Query Frame = -2 Query: 287 RVYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 664 + Y TG+RK +IARVW++ G GK +VN+K + YFP + +L PF TKT+ +DV CTVKGGG+SGQ GA+ GIS+AL P LR G LTRDSRVVERKK G+ KARK Q+ KR Sbjct: 36 KFYATGKRKNAIARVWLKVGKGKIVVNNKILNQYFPSETYVKTILQPFILTKTIDQYDVICTVKGGGISGQKGAILHGISKALDKSAPCFHAILRKGGLLTRDSRVVERKKYGQRKARKKTQFSKR 161
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_METNO (30S ribosomal protein S9 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rpsI PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.536e-30 Identity = 68/127 (53.54%), Postives = 85/127 (66.93%), Query Frame = -2 Query: 287 GRVYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 667 GR Y TG+RK ++ARVWI+PG G VND+ D YF R L P + +D+ TV GGG+SGQ GAVR G++RAL +EP+LR L+ GFLTRD RVVERKK G+ KAR+SFQ+ KR Sbjct: 36 GRAYATGKRKDAVARVWIKPGAGTITVNDRPVDTYFARPVLRMILQQPLHVANRVDQYDIVVTVTGGGLSGQAGAVRHGLARALTYYEPELRSPLKREGFLTRDPRVVERKKYGRKKARRSFQFSKR 162
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_LISW6 (30S ribosomal protein S9 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=rpsI PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.313e-30 Identity = 65/124 (52.42%), Postives = 88/124 (70.97%), Query Frame = -2 Query: 287 YGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 658 YGTGRRK S+ARV + PGDGK ++N+++++ Y P R + P T+TLG +DV V+GGG +GQ GA+R G++RAL P+ RPAL+SAG LTRDSR+ ERKKPG AR++ Q+ KR Sbjct: 7 YGTGRRKSSVARVRLVPGDGKIVINNRDWEDYIPFAALREVIKQPLVATETLGNYDVLVNVRGGGYTGQAGAIRHGVARALLQVAPEYRPALKSAGLLTRDSRMKERKKPGLKGARRAPQFSKR 130 The following BLAST results are available for this feature:
BLAST of CF834358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834358 ID=CF834358; Name=CF834358; organism=Citrus sinensis; type=EST; length=668bpback to top |