CF834358
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_METPB (30S ribosomal protein S9 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rpsI PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.326e-30 Identity = 67/127 (52.76%), Postives = 87/127 (68.50%), Query Frame = -2 Query: 287 GRVYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 667 GR Y TG+RK ++ARVWI+PG+G +VN + + YF R L P + +D+ TVKGGG+SGQ GAVR G+S+AL +EP+LR L+ GFLTRD RVVERKK G+ KAR+SFQ+ KR Sbjct: 35 GRAYATGKRKDAVARVWIKPGNGTVVVNGRAVETYFARPVLRMILRQPLEIVGRVDQYDITVTVKGGGLSGQAGAVRHGLSKALTYYEPELRSPLKREGFLTRDPRVVERKKYGRKKARRSFQFSKR 161
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_CARHZ (30S ribosomal protein S9 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rpsI PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.326e-30 Identity = 66/124 (53.23%), Postives = 84/124 (67.74%), Query Frame = -2 Query: 287 YGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 658 YGTGRRK ++ARV++ PG+G +N K + YFP + + P T T+G +DV V GGG+SGQ GAVRLGI+RAL +P LRP L+ AGFLTRD R+VERKK G K+R+ QW KR Sbjct: 7 YGTGRRKEAVARVFVVPGEGNITINGKSLEEYFPRKTLQIIVKQPLELTNTVGKFDVKAKVHGGGISGQAGAVRLGIARALVQADPSLRPVLKKAGFLTRDPRMVERKKYGLRKSRRRPQWTKR 130
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_RICTY (30S ribosomal protein S9 OS=Rickettsia typhi GN=rpsI PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.380e-30 Identity = 67/124 (54.03%), Postives = 84/124 (67.74%), Query Frame = -2 Query: 287 YGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 658 Y TG+RK +IARVW++ G GK +VN+K + YFP + +L PF TKT+ +DV CTV+GGG+SGQ GA+ GIS+AL P LR G LTRDSRVVERKK G+ KARK Q+ KR Sbjct: 38 YATGKRKNAIARVWLKVGKGKIVVNNKILNQYFPSETYIKTILQPFLLTKTIDQYDVICTVRGGGISGQKGAILHGISKALDKSAPCFHAILRKGGLLTRDSRVVERKKYGQRKARKKTQFSKR 161
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_LISMO (30S ribosomal protein S9 OS=Listeria monocytogenes GN=rpsI PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.380e-30 Identity = 65/124 (52.42%), Postives = 87/124 (70.16%), Query Frame = -2 Query: 287 YGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 658 YGTGRRK S+ARV + PGDGK ++N+++++ Y P R + P T+TLG +DV V GGG +GQ GA+R G++RAL P+ RPAL+SAG LTRDSR+ ERKKPG AR++ Q+ KR Sbjct: 7 YGTGRRKSSVARVRLVPGDGKIVINNRDWEDYIPFAALREVIKQPLVATETLGNYDVLVNVHGGGYTGQAGAIRHGVARALLQVAPEYRPALKSAGLLTRDSRMKERKKPGLKGARRAPQFSKR 130
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_METS4 (30S ribosomal protein S9 OS=Methylobacterium sp. (strain 4-46) GN=rpsI PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.644e-29 Identity = 66/127 (51.97%), Postives = 85/127 (66.93%), Query Frame = -2 Query: 287 GRVYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 667 GR Y TG+RK ++ARVWI+PG G VND+ + YF R L P +D+ TV GGG+SGQ GAVR G+++AL ++EP+LR L+ GFLTRD RVVERKK G+ KAR+SFQ+ KR Sbjct: 36 GRAYATGKRKDAVARVWIKPGSGVITVNDRPVETYFARPVLRMILQQPLQVANRADQYDIVVTVTGGGLSGQAGAVRHGLAKALTHYEPELRSPLKREGFLTRDPRVVERKKYGRKKARRSFQFSKR 162
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_LACLS (30S ribosomal protein S9 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=rpsI PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.644e-29 Identity = 68/123 (55.28%), Postives = 84/123 (68.29%), Query Frame = -2 Query: 287 GTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 655 GTGRRK ++ARV + PG GK VN +E + Y P D R + PF T+T G +D V GGGVSGQ GA+R GI+RAL +PD R AL+ AG LTRD+R+VERKKPG KARK+ Q+ KR Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNGREVESYIPHADMRLVINQPFAATQTEGSYDTLVNVNGGGVSGQAGAIRHGIARALLQVDPDFRSALKRAGLLTRDARMVERKKPGLKKARKASQFSKR 130
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_LACLM (30S ribosomal protein S9 OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rpsI PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.644e-29 Identity = 68/123 (55.28%), Postives = 84/123 (68.29%), Query Frame = -2 Query: 287 GTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 655 GTGRRK ++ARV + PG GK VN +E + Y P D R + PF T+T G +D V GGGVSGQ GA+R GI+RAL +PD R AL+ AG LTRD+R+VERKKPG KARK+ Q+ KR Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNGREVESYIPHADMRLVINQPFAATQTEGSYDTLVNVNGGGVSGQAGAIRHGIARALLQVDPDFRSALKRAGLLTRDARMVERKKPGLKKARKASQFSKR 130
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_LACLA (30S ribosomal protein S9 OS=Lactococcus lactis subsp. lactis GN=rpsI PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.644e-29 Identity = 68/123 (55.28%), Postives = 84/123 (68.29%), Query Frame = -2 Query: 287 GTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 655 GTGRRK ++ARV + PG GK VN +E + Y P D R + PF T+T G +D V GGGVSGQ GA+R GI+RAL +PD R AL+ AG LTRD+R+VERKKPG KARK+ Q+ KR Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNGREVESYIPHADMRLVINQPFAATQTEGSYDTLVNVNGGGVSGQAGAIRHGIARALLQVDPDFRSALKRAGLLTRDARMVERKKPGLKKARKASQFSKR 130
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_THET2 (30S ribosomal protein S9 OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=rpsI PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.783e-29 Identity = 66/124 (53.23%), Postives = 87/124 (70.16%), Query Frame = -2 Query: 287 YGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 658 YGTGRRK ++ARV+++PG+GK VN ++F+ YF L A L P LG +D TV+GGG SGQ+ A++LGI+RAL + PD R L+ GFLTRD+RVVERKK GK KAR++ Q+ KR Sbjct: 5 YGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR 128
BLAST of CF834358 vs. ExPASy Swiss-Prot
Match: RS9_METRJ (30S ribosomal protein S9 OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=rpsI PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.783e-29 Identity = 65/127 (51.18%), Postives = 86/127 (67.72%), Query Frame = -2 Query: 287 GRVYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRGALLGPFFETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 667 GR Y TG+RK ++ARVWI+PG+G +N + + YF R L P + +D+ TV GGG+SGQ GAVR G+S+AL +EP+LR L+ GFLTRD+RVVERKK G+ KAR+SFQ+ KR Sbjct: 35 GRAYATGKRKDAVARVWIKPGNGTVTINKRPVETYFARPVLRMILRQPLEIAGRVDQYDITVTVAGGGLSGQAGAVRHGLSKALTYYEPELRAPLKREGFLTRDARVVERKKYGRKKARRSFQFSKR 161 The following BLAST results are available for this feature:
BLAST of CF834358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834358 ID=CF834358; Name=CF834358; organism=Citrus sinensis; type=EST; length=668bpback to top |