CF834368

Overview
NameCF834368
Unique NameCF834368
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.033e-31
Identity = 59/91 (64.84%), Postives = 73/91 (80.22%), Query Frame = 2
Query:   95 ITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367
            ITCGQVS +LAPCI +++ GG +P  CCNG+R++N  ARTTPDRQ ACNCLKQ + S+P +N NNAA LPG CGV IPYKIS ST+C+ V+
Sbjct:    1 ITCGQVSSALAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVHIPYKISASTNCATVK 91          
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.349e-31
Identity = 63/104 (60.58%), Postives = 77/104 (74.04%), Query Frame = 2
Query:   53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364
            +LC++V  P +   ITCG VS  LAPCIG+LK GGP+   CC G+++LNAAA TTPDR+TACNCLK AA +I  +N   AAGLPG CGV IPY IS ST+C+ V
Sbjct:   14 LLCIVVAAPYAEAGITCGMVSSKLAPCIGYLK-GGPLGGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNCNAV 116          
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP3_BRANA (Non-specific lipid-transfer protein 3 OS=Brassica napus GN=LTP3 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.349e-31
Identity = 61/104 (58.65%), Postives = 80/104 (76.92%), Query Frame = 2
Query:   59 CMLVTGPLSAQA-ITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367
            CM+V GP++  A ++CG VSG+LA CIG+L   GP+P  CC+GV SLN  ARTTPDRQ AC CL  AA ++P++N+  AAGLP ACGV+IPYKIS +T+C+ V+
Sbjct:   14 CMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 117          
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.349e-31
Identity = 65/106 (61.32%), Postives = 81/106 (76.42%), Query Frame = 2
Query:   53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367
            V+CM+V  P++  AI+CG V+  L+PC+ +L +GGP P P CC GV+ L AAA TTPDRQ ACNCLK AA SI  LN NNAA LPG CGV+IPYKIST+T+C+ V+
Sbjct:   13 VICMVVIAPMAEGAISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117          
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP5_LENCU (Non-specific lipid-transfer protein 5 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.300e-31
Identity = 66/106 (62.26%), Postives = 82/106 (77.36%), Query Frame = 2
Query:   53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367
            V+CM+V  P++  AI+CG V+G L+PC+ +L +GGP P P CC GV+ L AAA TTPDRQ ACNC+K AA SI  LN NNAA LPG CGV+IPYKISTST+C+ V+
Sbjct:   13 VMCMIVA-PMAEGAISCGAVTGDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCMKSAASSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 116          
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP1_BRANA (Non-specific lipid-transfer protein 1 OS=Brassica napus GN=LTP1 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.300e-31
Identity = 63/104 (60.58%), Postives = 77/104 (74.04%), Query Frame = 2
Query:   59 CMLVTGPLSAQA-ITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367
            CM+V GP++  A ++CG VSG+LA CIG+L   GP+P  CC GV +LN  ARTTPDRQ AC CL  AA + P+LN   AAGLP ACGV+IPYKIS ST+C+ VR
Sbjct:   14 CMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANAFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117          
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.924e-31
Identity = 60/104 (57.69%), Postives = 78/104 (75.00%), Query Frame = 2
Query:   56 LCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367
            LCM V+    A AITC QVS +LAPCI +++SGG +P  CCNG++++N  A+TTPDRQ ACNCLK  A S+  +N  NA  LPG CGV++PYKISTST+C+ V+
Sbjct:   15 LCMAVS---VAHAITCSQVSANLAPCINYVRSGGAVPPACCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK 115          
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.125e-31
Identity = 58/91 (63.74%), Postives = 73/91 (80.22%), Query Frame = 2
Query:   95 ITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367
            ITCGQVS +LAPCI ++K GG +P  CCNG+R++N  ARTT DR+ ACNCLKQ + SIP +N NNAA LPG CGV++PYKIS ST+C+ V+
Sbjct:    1 ITCGQVSSNLAPCINYVKGGGAVPPACCNGIRNVNNLARTTADRRAACNCLKQLSGSIPGVNPNNAAALPGKCGVNVPYKISASTNCATVK 91          
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.693e-31
Identity = 62/105 (59.05%), Postives = 80/105 (76.19%), Query Frame = 2
Query:   53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367
            ++C+++  P++  AITCG+V  +LAPC+G+L+ G      CC GVR+LN+AA TTPDRQ ACNCLK AA SI  LN NNAA LPG C V+IPYKISTST+C+ +R
Sbjct:   12 IMCIVIA-PMAESAITCGRVDTALAPCLGYLQGGPGPSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSISRLNANNAAALPGKCVVNIPYKISTSTNCATIR 115          
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.491e-30
Identity = 61/103 (59.22%), Postives = 79/103 (76.70%), Query Frame = 2
Query:   62 MLVTGPLSAQAITCGQVSGSLAPCIGFLKS--GGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364
            +L T P +   +TCGQV+G+LAPC+G+L+S    P+P+ CCN VR LN AARTT D++TAC CLKQ A ++  LNLN AAGLP  CGV+IPYKIS +TDC++V
Sbjct:   17 VLATTPNAEAVLTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119          
The following BLAST results are available for this feature:
BLAST of CF834368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
NLTP1_PRUPE1.033e-3164.84Non-specific lipid-transfer protein 1 OS=Prunus pe... [more]
NLTP_SPIOL1.349e-3160.58Non-specific lipid-transfer protein OS=Spinacia ol... [more]
NLTP3_BRANA1.349e-3158.65Non-specific lipid-transfer protein 3 OS=Brassica ... [more]
NLTP2_LENCU1.349e-3161.32Non-specific lipid-transfer protein 2 OS=Lens culi... [more]
NLTP5_LENCU2.300e-3162.26Non-specific lipid-transfer protein 5 OS=Lens culi... [more]
NLTP1_BRANA2.300e-3160.58Non-specific lipid-transfer protein 1 OS=Brassica ... [more]
NLTP_PYRCO3.924e-3157.69Non-specific lipid-transfer protein OS=Pyrus commu... [more]
NLTP1_PRUDO5.125e-3163.74Non-specific lipid-transfer protein 1 OS=Prunus do... [more]
NLTP_CICAR6.693e-3159.05Non-specific lipid-transfer protein OS=Cicer ariet... [more]
NLTP_DAUCA1.491e-3059.22Non-specific lipid-transfer protein OS=Daucus caro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05G15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05G15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834368 ID=CF834368; Name=CF834368; organism=Citrus sinensis; type=EST; length=585bp
GCCGTTAAGGAGAAATGTGAAATGGNTGCCCTCAAGCTTGTTCCCTTTTT
AGGTTCTGTGCATGTTGGTGACTGGTCCCCTGAGTGCTCAGGCCATAACA
TGTGGGCAGGTGAGTGGCTCATTGGCACCATGCATCGGTTTCTTGAAATC
GGGCGGCCCTATACCTATGCCATGCTGCAACGGCGTCAGGTCTCTCAACG
CTGCCGCCAGAACCACACCTGACCGCCAAACTGCATGCAACTGCTTGAAG
CAAGCCGCCAGATCAATCCCTAGCCTCAACCTTAATAATGCTGCTGGTCT
TCCAGGAGCTTGTGGAGTCAGCATTCCTTACAAGATCAGCACCTCCACTG
ACTGCTCTAAGGTCAGGTGAACAGGAATCTGGGCCGTTGATTTTCAGGCT
TAAGTTGACGGAGTAGAATAAATGTATAATAATAAGGACATTTTTGTGTC
CGATTTATGAGTCTCTCTCTACACTTTGTACTGCGAGTCTCGTTCGCGCC
CTCGTTTCATGTTATGTTTTATTGTCTTTGCTTTTCATGTCATCGTCAGT
TTGTGTCTATTCTGATTATTAAATGAAATCTTGCC
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