CF834368
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.491e-30 Identity = 59/105 (56.19%), Postives = 82/105 (78.10%), Query Frame = 2 Query: 59 CMLVTGPLSA-QAITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSI-PSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367 CM+V GP++A +A+TCG V+ ++APCIG++ GG +P CC GV LN+ ARTTPDRQ AC CL+ AAR++ P+LN AAG+P ACGVS+P+ IST+T+C+ V+ Sbjct: 14 CMIVAGPITANRALTCGTVNSNVAPCIGYITQGGTLPGACCTGVSKLNSMARTTPDRQQACRCLETAARALGPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP1_TOBAC (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum GN=LTP1 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.491e-30 Identity = 65/107 (60.75%), Postives = 81/107 (75.70%), Query Frame = 2 Query: 47 F*VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367 F VLCM+V P A+AITCGQV+ +LAPC+ +L++ GP+ CC GV++L +ARTT DRQ AC CLK AA +I +NL AAGLP CGV+IPYKIS STDCSKV+ Sbjct: 10 FVVLCMVVAAPC-AEAITCGQVTSNLAPCLAYLRNTGPLGR-CCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ 114
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.947e-30 Identity = 61/105 (58.10%), Postives = 83/105 (79.05%), Query Frame = 2 Query: 59 CMLVTGPLSAQA-ITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPS-LNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367 CM+V GP+++ A ++CG V+ +LA CIG++ GG IP CC+GV++LN+ A+TTPDRQ ACNC++ AAR++ S LN AAG+P ACGV+IPYKISTST+C VR Sbjct: 14 CMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.322e-30 Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = 2 Query: 53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGP--IPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367 VLCM+V PL+ A+T GQV+ SLAPCI +L+ G +P CC G++SLN+AA+TTP RQ AC C+K AA I +N A+GLPG CGV+IPYKIS STDC+ V+ Sbjct: 14 VLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.322e-30 Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = 2 Query: 53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGP--IPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367 VLCM+V PL+ A+T GQV+ SLAPCI +L+ G +P CC G++SLN+AA+TTP RQ AC C+K AA I +N A+GLPG CGV+IPYKIS STDC+ V+ Sbjct: 10 VLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.666e-30 Identity = 60/104 (57.69%), Postives = 74/104 (71.15%), Query Frame = 2 Query: 53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364 V CM+ + A AI+CGQV+ L PC G+L +GGP+P CCNGVR LN AA+TTPDRQTAC CLK + +NLNNA LPG CG+SI YKI+ + DCSK+ Sbjct: 13 VACMVFSASY-ADAISCGQVTSGLVPCFGYLAAGGPVPPACCNGVRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.400e-30 Identity = 60/105 (57.14%), Postives = 80/105 (76.19%), Query Frame = 2 Query: 59 CMLVTGPLSAQA-ITCGQVSGSLAPCIGFLKSGGP-IPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367 CM+V GP+++ A ++CG VSG +APCIG+L P +P CC+GV SLN ARTTPDRQ AC CL AA ++P++N+ AAGLP ACGV+IPYKIS +T+C+ V+ Sbjct: 14 CMIVAGPITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.265e-29 Identity = 61/107 (57.01%), Postives = 79/107 (73.83%), Query Frame = 2 Query: 47 F*VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367 F VLCM+V P A+A++CGQV LAPC+ +L+ GP+ CC GV+ L AA++ DR+TAC CLK AA +I +++ AAGLPGACGV+IPYKIS STDCSKV+ Sbjct: 10 FVVLCMVVVAP-HAEALSCGQVQSGLAPCLPYLQGRGPLGS-CCGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.069e-28 Identity = 59/105 (56.19%), Postives = 73/105 (69.52%), Query Frame = 2 Query: 59 CMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNN--AAGLPGACGVSIPYKISTSTDCSKVR 367 CM V GP + A++CGQV +L PCI ++ +GG + CC GVRSL + A+TT DRQ+ CNCLKQA IP N N AAGLPG CGV+IPYKIS STDC ++ Sbjct: 19 CMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPSCCTGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.381e-28 Identity = 58/104 (55.77%), Postives = 72/104 (69.23%), Query Frame = 2 Query: 53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364 V +L+ P +A AITCGQV+ ++ PC+ + + G CC+GVRSL AAA TT DR+TACNCLK AAR I LN NAA +P CGVS+PY IS S DCS+V Sbjct: 12 VAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115 The following BLAST results are available for this feature:
BLAST of CF834368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834368 ID=CF834368; Name=CF834368; organism=Citrus sinensis; type=EST; length=585bpback to top |