CF834368
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.801e-26 Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 2 Query: 53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364 V+CM+V PL A+AITCG V+ LAPCIG+L+ CC G++SLN+AA + DR+TAC CLK AA SI +N AA LP CGVS+PY IS +T+C+ + Sbjct: 14 VMCMMVAAPL-AEAITCGLVASKLAPCIGYLQGAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNCNAI 116
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 2 Query: 53 VLCMLVTGPLSAQA-ITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPS-LNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367 ++CMLVT P++++A I+CG V+GSL C +L GG IP CC+GV+ LN+ ARTT DRQ AC C++ AAR++ S LN AA LPGAC V I Y IS T+C+ VR Sbjct: 12 IVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGGFIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTVR 118
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.557e-24 Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPM-PCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364 ++ ML P +A A+ CGQV + PC+ +++ GGP P CCNGVR L+ A+++ DRQT CNCLK AR I +LNLNNAA +P C V++PY IS DCS++ Sbjct: 13 LVLMLTAAPRAAVALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 4.646e-24 Identity = 48/90 (53.33%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 95 ITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364 ++CG V+ +A CI +L+ GP+P CCNGV++L +A TT DR+TAC CL A+++I +N AAGLP CGVSIPYKIS ST+C +V Sbjct: 1 LSCGDVATQMASCINYLRGAGPLPAACCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.925e-24 Identity = 54/107 (50.47%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMP--CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367 VLC+LV PL+ AI+ QV SL PC+G+++ P P C G+RSL +AAR DRQ AC C+K A I +N AAGLPG C V IPYKIS S DC +V+ Sbjct: 14 VLCLLVDAPLAQGAISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.306e-23 Identity = 48/92 (52.17%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 92 AITCGQVSGSLAPCIGFLK-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364 AI+CGQVS +L+PCI + + +G P+ CC+GV+ L AA++T D+Q AC CLK A SI +N+ +G+PG CGVS+P+ IS STDC+KV Sbjct: 26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.762e-23 Identity = 51/93 (54.84%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 92 AITCGQVSGSLAPCIGFLKSGGPIPMPCC-NGVRSLNAAARTTPDRQTACNC-LKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364 AI+CGQVS ++ PC+ + + G P C +GVRSLNAAARTT DR+ ACNC LK AA + LN A+ +PG CGV +PY IS S DCS+V Sbjct: 1 AISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 2 Query: 53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMP---CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364 V+ +L+ P +A A+TCGQV LAPCI + + G + P CC+GVR+LN+AA TT DRQT C CLKQ ++ L + AG+P CGV+IPY IS STDCS+V Sbjct: 15 VVALLLAAP-AASAVTCGQVVSMLAPCIMY--ATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.349e-22 Identity = 49/93 (52.69%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 92 AITCGQVSGSLAPCIGFLK-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367 AI+CGQVS +L+PCI + + +G P+ CC+GV+ L AA++T D+Q AC C+K AA LN AAG+P CGVS+PY IS S DCSK+R Sbjct: 26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.349e-22 Identity = 49/93 (52.69%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 92 AITCGQVSGSLAPCIGFLK-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367 AI+CGQVS +L+PCI + + +G P+ CC+GV+ L AA++T D+Q AC C+K AA LN AAG+P CGVS+PY IS S DCSK+R Sbjct: 26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115 The following BLAST results are available for this feature:
BLAST of CF834368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834368 ID=CF834368; Name=CF834368; organism=Citrus sinensis; type=EST; length=585bpback to top |