CF834368
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.418e-22 Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364 V+ V ++ A++CG V+ S+APC+ ++ P CC+GVR+LN A ++ DR+TAC+CLK A S +LN+ NAA +P CGVS+ + ISTS DCSK+ Sbjct: 16 VVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.418e-22 Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364 V+ V ++ A++CG V+ S+APC+ ++ P CC+GVR+LN A ++ DR+TAC+CLK A S +LN+ NAA +P CGVS+ + ISTS DCSK+ Sbjct: 16 VVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.418e-22 Identity = 49/93 (52.69%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 92 AITCGQVSGSLAPCIGFLK-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367 AI+CGQVS +L+PCI + + +G P CC+GV+ L AA++T D+Q AC C+K AA LN AAG+P CGVS+PY IS S DCSK+R Sbjct: 26 AISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.265e-21 Identity = 49/104 (47.12%), Postives = 65/104 (62.50%), Query Frame = 2 Query: 53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364 VL + + P + I CG V+ +LA C+ +L + GP+P CC GV+SL A+TTPDR+ C CLK A + I LN + A LP CGVSIPY IS ST+C + Sbjct: 13 VLTIYMASPTES-TIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.158e-21 Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPM-PCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364 ++ ML P +A AI CG V + PC+ +++ GGP P CC+GV++L+ AR+ DRQ+ACNCLK AR I +LN +NA +P CGV++PY IS + DCS+V Sbjct: 10 LVLMLAAVPRAAVAIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.386e-20 Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 Query: 62 MLVTGPLSAQA-ITCGQVSGSLAPCIGFLKSGG---PIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSI-PSLNLNNAAGLPGACGVSIPY--KISTSTDCS 358 ++ GP++A+A ++CG+V+ +L PC G+L +GG P P CCNGVR LN TT DR+ AC C+K AAR++ P LN + AAG+P CG+ IPY +I +T C+ Sbjct: 15 VIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQ-CCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.070e-20 Identity = 47/92 (51.09%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 92 AITCGQVSGSLAPCIGFLKSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364 AITCGQVS +L PC + K G P CC+GV+ L AR+T D+Q C CLK A + N AAG+P CGVS+PY IS S DCSK+ Sbjct: 26 AITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAY---NAGRAAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.500e-19 Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 2 Query: 56 LCMLVTGPL---SAQAITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAAR--SIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367 LC+L+ S AI+C V +L PC+ ++ GG IP CCNG+R L+ A + D+Q C C+K S S+ L AA LPG CGV +PYKI ST+C+ ++ Sbjct: 8 LCLLLASIFAWGSEAAISCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.877e-19 Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 2 Query: 56 LCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQA--ARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 367 +C+++ A++C V L PC+ ++ GGP+P CCNG+ +L + A+T+ DRQ C C+K A ++ + NA LP CGV +PYK S STDC ++ Sbjct: 8 VCLVLALHCGEAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113
BLAST of CF834368 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.309e-18 Identity = 49/105 (46.67%), Postives = 65/105 (61.90%), Query Frame = 2 Query: 53 VLCMLVTGPLSAQAITCGQVSGSLAPCIGFLKSGG-PIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 364 V+ +L+ +AI C QV+ LA C+ +LK+GG P PM CCNG+ SL AAA DRQ ACNCLK A +IP +N + A LP CGV+I S + DC+ + Sbjct: 15 VITILLGIAYHGEAIACPQVNMYLAQCLPYLKAGGNPSPM-CCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118 The following BLAST results are available for this feature:
BLAST of CF834368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834368 ID=CF834368; Name=CF834368; organism=Citrus sinensis; type=EST; length=585bpback to top |