CF834421

Overview
NameCF834421
Unique NameCF834421
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS14_ARATH (Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis thaliana GN=KCS14 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 6.114e-81
Identity = 144/225 (64.00%), Postives = 177/225 (78.67%), Query Frame = -2
Query:  171 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEK---NPWIEEIHEFPVHV 836
            NCLFR+GGAA++L         SKY+L H VRTHKG+ DK Y C  Q+ED    VGV+LSK+L  VAG+ LKTN+T LGP+VLP+SE+L F   LV  K+F++K+ PY+PDFKL F+HFCIHAGGRA+LD +EK L LSE+ +EPSRMTL+RFGNTSSSSLWYELAY EAK R+++GDR WQ+AFGSGFKCNS VW+ALRTI PA E    NPW + +H++PVHV
Sbjct:  235 NCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCNSIVWRALRTI-PANESLVGNPWGDSVHKYPVHV 458          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS16_ARATH (3-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana GN=KCS16 PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.275e-78
Identity = 144/231 (62.34%), Postives = 172/231 (74.46%), Query Frame = -2
Query:  144 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRVAAVDLK 836
            NCLFR+GGAAILL         +KY+L+HTVR H GADD+ Y C  Q ED+   VGVSLSK+L  VA   LK NI TLGP+VLP+SE+  FF   V KK    K+K YIPDFKLAFEHFCIHAGGRA++DE+EKNL L+   +E SRMTL+RFGNTSSSS+WYELAY+EAKGRM KGDR WQIA GSGFKCNS+VW ALR + P+   NPW + +H++PV +     +DLK
Sbjct:  267 NCLFRIGGAAILLSNRSIDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPISEKFHFFVRFVKKKFLNPKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMTKGDRIWQIALGSGFKCNSSVWVALRNVKPS-TNNPWEQCLHKYPVEID----IDLK 492          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS8_ARATH (3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana GN=KCS8 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 5.356e-77
Identity = 135/222 (60.81%), Postives = 171/222 (77.03%), Query Frame = -2
Query:  171 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHV 836
            NCLFR+GGAA+LL         +KY+L+HTVR H G+DD+ + C  Q ED+   +GV+L+K+L  VA   LK NI TLGP+VLP+ E+L FF T V KK FK +++ Y PDFKLAFEHFCIHAGGRA++DELEKNL+LS  H+E SRMTL+RFGNTSSSS+WYELAY+EAKGRM++GDR WQIA GSGFKCNS+VW ALR + P+   +PW + +  +PV +
Sbjct:  259 NCLFRVGGAAVLLSNRSRDRNRAKYELVHTVRIHTGSDDRSFECATQEEDEDGIIGVTLTKNLPMVAARTLKINIATLGPLVLPLKEKLAFFITFVKKKYFKPELRNYTPDFKLAFEHFCIHAGGRALIDELEKNLKLSPLHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKEGDRIWQIALGSGFKCNSSVWVALRDVKPS-ANSPWEDCMDRYPVEI 479          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS18_ARATH (3-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana GN=FAE1 PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 5.356e-77
Identity = 143/223 (64.13%), Postives = 171/223 (76.68%), Query Frame = -2
Query:  171 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPY-IPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHV 836
            NCLFR+GGAAILL         SKY+L+HTVRTH GADDK + CV Q +D++ ++GV LSKD+  VAG  L  NI TLGP++LP+SE+ LFFAT VAKK+ K KIK Y +PDFKLA +HFCIHAGGRAV+DELEKNL LS   +E SR TL+RFGNTSSSS+WYELAY EAKGRM+KG++ WQIA GSGFKCNSAVW ALR +  A   +PW   I  +PV +
Sbjct:  269 NCLFRVGGAAILLSNKSGDRRRSKYKLVHTVRTHTGADDKSFRCVQQEDDESGKIGVCLSKDITNVAGTTLTKNIATLGPLILPLSEKFLFFATFVAKKLLKDKIKHYYVPDFKLAVDHFCIHAGGRAVIDELEKNLGLSPIDVEASRSTLHRFGNTSSSSIWYELAYIEAKGRMKKGNKAWQIALGSGFKCNSAVWVALRNVK-ASANSPWQHCIDRYPVKI 490          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS10_ARATH (3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 2.180e-70
Identity = 134/246 (54.47%), Postives = 166/246 (67.48%), Query Frame = -2
Query:  177 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAK--------------------KVFKMKI------KPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPV 836
            NC FRMG +A++L         +KY+L H VRTHK ADD+ +  V+Q ED+    G+ +S+DLM V GEALKTNITTLGP+VLP SEQLLFFA L+ +                    K   +K       KPYIPD+KLAFEHFC HA  + VL+EL+KNL LSE +ME SRMTL+RFGNTSSS +WYELAY EAK  +R+GDR WQIAFGSGFKCNS VW+A+R +      NPW++ I+ +PV
Sbjct:  303 NCFFRMGCSAVMLSNRRRDFRHAKYRLEHIVRTHKAADDRSFRSVYQEEDEQGFKGLKISRDLMEVGGEALKTNITTLGPLVLPFSEQLLFFAALLRRTFSPAAKTSTTTSFSTSATAKTNGIKSSSSDLSKPYIPDYKLAFEHFCFHAASKVVLEELQKNLGLSEENMEASRMTLHRFGNTSSSGIWYELAYMEAKESVRRGDRVWQIAFGSGFKCNSVVWKAMRKVKKPTRNNPWVDCINRYPV 548          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS20_ARATH (Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana GN=KCS20 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.703e-65
Identity = 119/225 (52.89%), Postives = 160/225 (71.11%), Query Frame = -2
Query:  168 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKM--KIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVP 836
            NCLFRMG AA+L+         +KY+L+H VR +K  DD+ Y C++Q  D  ++ GVS++KD+++VAG+ LK N+T+LGP+VLP  EQ  +    +  K  K+      Y P+FK AFEHFCIH GGRAV+  +E NL+L++  +EPS+MTL+RFGNTSSSS+WY L+Y EAK RM+KGDR  QIAFGSGFKCNSAVW+ +R + P  E N W++ I  +PV VP
Sbjct:  233 NCLFRMGAAAVLMSSNDHDRDNAKYELLHVVRKNKAKDDRAYRCIYQDIDSDEKQGVSITKDVISVAGDMLKMNLTSLGPLVLPYLEQFQYVIQHILCKKLKIYESNSSYTPNFKTAFEHFCIHTGGRAVIQAMEMNLKLTKVDIEPSKMTLHRFGNTSSSSIWYALSYLEAKRRMKKGDRVLQIAFGSGFKCNSAVWRCIRKVEPNTE-NKWLDFIDSYPVDVP 456          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS7_ARATH (3-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana GN=KCS7 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.673e-62
Identity = 119/220 (54.09%), Postives = 158/220 (71.82%), Query Frame = -2
Query:  177 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPV 836
            N +FRMGGAAILL         +KY+L H +RTH G+D + Y  V Q+ D+  +VGV+LSK L+ VA +ALK N+  LGP VLP SEQL +  + + +K + M  + Y P+FK AFEHFCIHAGGRA+++ +EK+L+L +  +E SR TLYR+GNTSSSSLWYEL Y EAKGRM+ GD+ WQI FGSGFK NSAVW+ +  I+ ++ +N W + IH +PV
Sbjct:  229 NTIFRMGGAAILLSNRKQDSHKAKYKLQHIIRTHVGSDTESYESVMQQVDEEGKVGVALSKQLVRVASKALKINVVQLGPRVLPYSEQLKYIISFIQRK-WGMHKEIYTPNFKKAFEHFCIHAGGRAIIEGVEKHLKLDKEDVEASRSTLYRYGNTSSSSLWYELQYLEAKGRMKMGDKVWQIGFGSGFKANSAVWKCISEID-SRGRNAWSDRIHLYPV 446          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS12_ARATH (3-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana GN=KCS12 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.581e-50
Identity = 103/233 (44.21%), Postives = 143/233 (61.37%), Query Frame = -2
Query:  180 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVF--------KMKIKPYIP-----DFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEK-NPWIEEIHEFP 836
            NCLFR GG AILL         + ++L   VRTH GA ++ YNC  Q ED+  RVG  L K+L   A  A   N+  + P +LP++E + F   L+ KK+            + P  P     +FK   EHFCIH GG+AV+D +  +L+L+E+ +EP+RMTL+RFGNTS+SSLWY LAY EAK R+++GDR + I+FG+GFKCNS VW+ +R +   + K N W   I ++P
Sbjct:  214 NCLFRSGGCAILLTNKRSLRKKAMFKLKCMVRTHHGAREESYNCCIQAEDEQGRVGFYLGKNLPKAATRAFVENLKVITPKILPVTELIRFMLKLLIKKIKIRQNPSKGSTNLPPGTPLKAGINFKTGIEHFCIHTGGKAVIDGIGHSLDLNEYDIEPARMTLHRFGNTSASSLWYVLAYMEAKKRLKRGDRVFMISFGAGFKCNSCVWEVVRDLTGGESKGNVWNHCIDDYP 446          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS15_ARATH (3-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana GN=KCS15 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.345e-48
Identity = 98/211 (46.45%), Postives = 129/211 (61.14%), Query Frame = -2
Query:  204 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPW 836
            NC FRMG AA++L         +KYQL+  VRTHKG +D  Y  +  RED   + G+ +S+D+M V   ALK NI TLG                        +++P       +FEH C+ A  + VLD++ K+L+L+E +ME SR TL RFGNTSSSS+WYELAY E K +M++GDR WQI FGSGFKCNS VW+AL+ I+P +  NPW
Sbjct:  270 NCFFRMGAAAVMLSSRRIDRWRAKYQLMQLVRTHKGMEDTSYKSIELREDRDGKQGLYVSRDVMEVGRHALKANIATLG------------------------RLEP-------SFEHICVLASSKKVLDDIHKDLKLTEENMEASRRTLERFGNTSSSSIWYELAYLEHKAKMKRGDRVWQIGFGSGFKCNSVVWKALKNIDPPRHNNPW 449          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS3_ARATH (3-ketoacyl-CoA synthase 3 OS=Arabidopsis thaliana GN=KCS3 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.985e-47
Identity = 100/235 (42.55%), Postives = 142/235 (60.43%), Query Frame = -2
Query:  180 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVF---------------KMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKE-KNPWIEEIHEFP 836
            NCLFR GG A+LL         + ++L   VRTH GA D  +N   Q+ED+   +GV L K L   A  A   N+  + P +LP++E L F   L+ KK+                K  +K  I +FK   +HFCIH GG+AV+D +  +L+L+E+ +EP+RMTL+RFGNTS+SSLWY L Y EAK R+++GDR + I+FG+GFKCNS VW+ +R +N  +   N W   I+++P
Sbjct:  257 NCLFRSGGCAVLLTNKRSLSRRAMFKLRCLVRTHHGARDDSFNACVQKEDELGHIGVHLDKTLPKAATRAFIDNLKVITPKILPVTELLRFMLCLLLKKLRSSPSKGSTNVTQAAPKAGVKAGI-NFKTGIDHFCIHTGGKAVIDAIGYSLDLNEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKRGDRVFMISFGAGFKCNSCVWEVVRDLNVGEAVGNVWNHCINQYP 490          
The following BLAST results are available for this feature:
BLAST of CF834421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS14_ARATH6.114e-8164.00Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis... [more]
KCS16_ARATH1.275e-7862.343-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana... [more]
KCS8_ARATH5.356e-7760.813-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana ... [more]
KCS18_ARATH5.356e-7764.133-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana... [more]
KCS10_ARATH2.180e-7054.473-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana... [more]
KCS20_ARATH4.703e-6552.89Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis... [more]
KCS7_ARATH1.673e-6254.093-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana ... [more]
KCS12_ARATH5.581e-5044.213-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana... [more]
KCS15_ARATH2.345e-4846.453-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana... [more]
KCS3_ARATH1.985e-4742.553-ketoacyl-CoA synthase 3 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05I02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834421 ID=CF834421; Name=CF834421; organism=Citrus sinensis; type=EST; length=837bp
CCTTTTTTTTTTTTTAATGAAAATCAAGAAATAATTTTATTGAAACTAAA
TATATGCATCCAAATATTACATATATAATCGTATTGTGAAGTATGCAAAT
CAATCAGATATAATACTCCCTCCATTGAAGGAAATTAAGAAGCCTTCAAA
TCAACAGCTGCTACTCTAGGGACATGAACAGGAAACTCATGAATCTCTTC
AATCCAAGGATTCTTCTCCTTTGCAGGATTGATAGTCCTCAATGCTTGCC
ACACAGCACTGTTACACTTGAATCCTGACCCAAATGCTATCTGCCATGTT
CTGTCTCCTTTTCTCATTCTCCCCTTAGCCTCAGAGTAAGCCAATTCATA
CCACAAAGAGCTGCTAGAAGTGTTACCAAATCTGTAAAGAGTCATTCTTG
AAGGCTCCATATGCCATTCACTGAGCTCAAGATTCTTCTCTAGCTCATCT
AGCACTGCTCTGCCTCCAGCATGGATGCAGAAATGCTCAAAAGCCAACTT
AAAATCTGGGATATATGGCTTGATTTTCATTTTAAAGACTTTTTTAGCAA
CCAAAGTTGCAAAAAATAAGAGTTGTTCTGACATCGGGAGGACTATTGGT
CCCAGTGTTGTGATGTTAGTCTTAAGGGCTTCTCCAGCGACAGCCATGAG
GTCCTTTGAGAGTGAAACTCCAACTCTTTTGGTATCATCTTCTCTTTGGA
AGACACAGTTGTAGCACTTGTCATCAGCTCCCTTGTGGGTCCTTACAGTG
TGGATGAGTTGGTACTTTGATCGGCGGCGATCGGAGGATCGGTTAGATAA
AAGGATAGCGGCACCACCCATGCGGAAGAGGCAATTT
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