CF834510

Overview
NameCF834510
Unique NameCF834510
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length554
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.990e-34
Identity = 70/144 (48.61%), Postives = 91/144 (63.19%), Query Frame = -3
Query:  121 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEG 552
            RKP         AQ R   +Q  G SI  C ++A+ DL PVK + ++YLGRPW++YSR V+++S I D I PAGW E   DFAL+ LYYGEY+N GPGA  +KRV WPG+  I    EA +F V   I G +WL STG+ ++ G
Sbjct:  388 RKPNPGHKIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFIDGSTWLNSTGIPFSLG 531          
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.990e-34
Identity = 74/141 (52.48%), Postives = 86/141 (60.99%), Query Frame = -3
Query:  118 SKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 540
            S   N V AQGR+ PNQN G SI  C +          GS ++YLGRPWK+YSR VVMQS I   I P+GWS WS +FALK LYYGE+ N GPG+  S RV W GY       EA+ F V+  I G SWL STGV +  GL
Sbjct:  397 SSDQNYVTAQGRSDPNQNTGISIHNCRIT---------GSTKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 528          
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.874e-33
Identity = 70/145 (48.28%), Postives = 87/145 (60.00%), Query Frame = -3
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            RKPM+KQ N + A GR  PNQN G SI  C + A+ DL     S  ++LGRPWK YSR V MQS I D + P GW EW+G   L  +YYGEY N GPGA T++RV+W GY ++    EA  F V     G +WL  T + +  GL
Sbjct:  472 RKPMAKQKNAITAHGRLDPNQNTGISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFGPGANTNQRVQWLGYNLLNL-AEAMNFTVYNFTMGDTWLPQTDIPFYGGL 615          
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.874e-33
Identity = 67/143 (46.85%), Postives = 90/143 (62.94%), Query Frame = -3
Query:  118 PMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 546
            PM  Q  ++ AQ R   +++ G S+Q C ++AS DL      ++SYLGRPW+E+SR VVM+S I + ID +GWS+W+G  AL  LYYGEY N GPG+ T KRV WPG+ ++   E+A  F   E I G  WL ST   Y  G+
Sbjct:  406 PMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIM-GYEDAFNFTATEFITGDGWLGSTSFPYDNGI 547          
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.753e-33
Identity = 65/141 (46.10%), Postives = 88/141 (62.41%), Query Frame = -3
Query:  130 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAY 552
            RKPM  QS M+ AQGR+   ++ G  +Q C +       PVK   ++YLGRPWKE+SR ++M + I D IDPAGW  W+GDFAL  LYY EY N GPG+  ++RVKWPG   + +P++A +F  A  + G  W+    V Y
Sbjct:  427 RKPMKSQSCMITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKL-SPKQALRFTPARFLRGNLWIPPNRVPY 566          
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.433e-32
Identity = 69/145 (47.59%), Postives = 85/145 (58.62%), Query Frame = -3
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            RKPMS Q N + AQ R  P++  G  IQ   V  +S+         +YLGRPW+ +SR V M+  +G  + PAGW  WSG FAL  LYYGEY N G GA  S RVKWPGY VI    EA+KF V   + G  W+ +TGV   +GL
Sbjct:  419 RKPMSGQKNTITAQSRKEPDETTGFVIQSSTVATASE---------TYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTVTEAEKFTVENFLDGNYWITATGVPVNDGL 554          
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.420e-32
Identity = 61/147 (41.50%), Postives = 91/147 (61.90%), Query Frame = -3
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEW--SGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            R+P+  Q+N++ AQGR  P QN G SI    ++ + DL+PV G++++Y+GRPW ++SR VV+Q+ + + + P GWS W     F L  L+Y EY N GP + T  RV W G+ V+    +A  F V + I G +WL  TG+ +T GL
Sbjct:  390 RRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGKFIAGTAWLPRTGIPFTSGL 536          
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 1.207e-31
Identity = 63/142 (44.37%), Postives = 89/142 (62.68%), Query Frame = -3
Query:  127 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYT 552
            RKP   Q+ MV AQGR+   ++ G  +  C +       P+K   ++YLGRPWKE+SR ++M++ I D IDPAGW  WSGDFALK LYY E++N GPG+  ++RVKWPG   +  P++A  +     + G +W+  T V YT
Sbjct:  425 RKPNKGQTCMVTAQGRSNVRESTGLVLHGCHITGDPAYIPMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKL-TPQDALLYTGDRFLRGDTWIPQTQVPYT 565          
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.588e-31
Identity = 69/145 (47.59%), Postives = 85/145 (58.62%), Query Frame = -3
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            RKPM+ Q N V A GRT PNQ  G SI  C + A+ DL     S  ++LGRPWK YSR V +QS I D + P GW EW+G   L  + YGEY N GPGA TSKRV+W GY ++    +A  F V     G +WL  T + +  GL
Sbjct:  477 RKPMANQKNAVTAHGRTDPNQKTGISIINCTIGAAPDLAADPKSTMTFLGRPWKPYSRTVYIQSYISDVVQPVGWLEWNGTTGLDTISYGEYDNFGPGADTSKRVQWSGYSLLNL-VQAMNFTVYNFTLGDTWLPQTDIPFYGGL 620          
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.744e-30
Identity = 66/145 (45.52%), Postives = 84/145 (57.93%), Query Frame = -3
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            R+PM  Q N + AQGRT PN N G SI +C +    DL  V     ++LGRPWK +S  V+M S +   ID  GW  W+GD A   ++YGEY N GPGA T  RVKW G   + + +EA +F V   I GG WL +T V +  GL
Sbjct:  422 RRPMKGQQNTITAQGRTDPNMNTGISIHRCNISPLGDLTDVM----TFLGRPWKNFSTTVIMDSYLHGFIDRKGWLPWTGDSAPDTIFYGEYKNTGPGASTKNRVKWKGLRFL-STKEANRFTVKPFIDGGRWLPATKVPFRSGL 561          
The following BLAST results are available for this feature:
BLAST of CF834510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PME39_ARATH1.990e-3448.61Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME35_ARATH1.990e-3452.48Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME25_ARATH2.874e-3348.28Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME12_ARATH2.874e-3346.85Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME58_ARATH3.753e-3346.10Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME6_ARATH2.433e-3247.59Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME59_ARATH5.420e-3241.50Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME23_ARATH1.207e-3144.37Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME47_ARATH4.588e-3147.59Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME24_ARATH1.744e-3045.52Putative pectinesterase/pectinesterase inhibitor 2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K11_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834510 ID=CF834510; Name=CF834510; organism=Citrus sinensis; type=EST; length=554bp
TTTTTTTTTTTTTTTTTAAGAACCTAGAACAGCACGTTACTCGGATTCAT
TCATTATTCAACTGATAAAAAGCAGGGGCAAATACAAGCTTAAAAGATAT
ATGCTGAGCTGACATCACAGCCCCTCAGTATAAGCAACTCCAGTTGATTT
CAACCACGACCCTCCTCCGATAAGCTCAGCTACTGGAAATTTTTTTGCTT
CTTCTGGGGCTGGAATAACGGGATAGCCAGGCCATTTCACTCTTTTGCTA
GTCCCAGCACCTGGCCCTCTATTCAAATACTCCCCATAATACAGGGGCTT
CAGGGCAAAATCTCCACTCCATTCTGACCATCCAGCTGGATCGATATGAT
CCCCGATGGGGGACTGCATTACAACTGGTCTCGAGTATTCTTTCCAAGGG
CGGCCCAAGTACGAACGGATCGAGCCCTTTACGGGCTCCAGATCTGAGCT
TGCTATGACTTCACATTTTTGGATCGAAGTCCCTGGGTTTTGATTTGGGG
CAGTCCGTCCTTGGGCTGGGACCATGTTGGATTGCTTGCTCATGGGCTTT
CTGG
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