CF834570
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS2_LEMGI (Ribulose bisphosphate carboxylase small chain SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.152e-11 Identity = 33/47 (70.21%), Postives = 36/47 (76.60%), Query Frame = -3 Query: 223 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKP 363 M+GCTDA QV+ EV E +K YP FV IIG NKRQVQCISFIA KP Sbjct: 130 MFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS1_LEMGI (Ribulose bisphosphate carboxylase small chain SSU1, chloroplastic OS=Lemna gibba GN=SSU1 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.152e-11 Identity = 33/47 (70.21%), Postives = 36/47 (76.60%), Query Frame = -3 Query: 223 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKP 363 M+GCTDA QV+ EV E +K YP FV IIG NKRQVQCISFIA KP Sbjct: 126 MFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 172
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS_GOSHI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Gossypium hirsutum GN=RBCS PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.504e-11 Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = -3 Query: 217 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKPPG 363 M+GCTD+ QVL+E+ +KEYP++F+ IIG N RQVQCISFIA KP G Sbjct: 133 MFGCTDSAQVLEELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPKG 181
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.965e-11 Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = -3 Query: 217 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKPPG 363 M+GCTDA QVL EV E +K YP ++V IIG N RQVQCISFIA KP G Sbjct: 131 MFGCTDATQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS3B_SOLLC (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Solanum lycopersicum GN=RBCS-3B PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.965e-11 Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = -3 Query: 217 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKPPG 363 M+GCTDA QVL EV E +K YP ++V IIG N RQVQCISFIA KP G Sbjct: 131 MFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS3A_SOLLC (Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic OS=Solanum lycopersicum GN=RBCS-3A/3C PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.965e-11 Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = -3 Query: 217 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKPPG 363 M+GCTDA QVL EV E +K YP ++V IIG N RQVQCISFIA KP G Sbjct: 131 MFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS2A_SOLLC (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum lycopersicum GN=RBCS-2A PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.965e-11 Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = -3 Query: 217 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKPPG 363 M+GCTDA QVL EV E +K YP ++V IIG N RQVQCISFIA KP G Sbjct: 131 MFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS1_SOLLC (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum lycopersicum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.965e-11 Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = -3 Query: 217 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKPPG 363 M+GCTDA QVL EV E +K YP ++V IIG N RQVQCISFIA KP G Sbjct: 132 MFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS_TOBAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana tabacum GN=RBCS PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.566e-11 Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = -3 Query: 217 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKPPG 363 M+GCTDA QVL EV E +K YP +++ IIG N RQVQCISFIA KP G Sbjct: 131 MFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS_MANES (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.566e-11 Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = -3 Query: 217 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKPPG 363 M+GCTDA QVLKE+ E+ K +P + IIG N RQVQCISF+A KPPG Sbjct: 133 MFGCTDAAQVLKELDELIKHHPDGYARIIGFDNVRQVQCISFLAYKPPG 181 The following BLAST results are available for this feature:
BLAST of CF834570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834570 ID=CF834570; Name=CF834570; organism=Citrus sinensis; type=EST; length=365bpback to top |