CF834570
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS1_SOLTU (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum tuberosum GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.566e-11 Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = -3 Query: 217 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKPPG 363 M+GCTDA QVL EV E +K YP +++ IIG N RQVQCISFIA KP G Sbjct: 132 MFGCTDATQVLAEVQECKKSYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS1_NICSY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana sylvestris GN=RBCS PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.566e-11 Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = -3 Query: 217 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKPPG 363 M+GCTDA QVL EV E +K YP +++ IIG N RQVQCISFIA KP G Sbjct: 131 MFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS3_FRIAG (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Fritillaria agrestis GN=RBCS3 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.351e-11 Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = -3 Query: 223 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKP 363 M+GCTDA QV+KE E +KEYP +F+ +IG N RQVQC+SFI KP Sbjct: 132 MFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS2_FRIAG (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.351e-11 Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = -3 Query: 223 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKP 363 M+GCTDA QV+KE E +KEYP +F+ +IG N RQVQC+SFI KP Sbjct: 132 MFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS_CAPAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.465e-11 Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = -3 Query: 223 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKP 363 M+GCTDA QVL EV E +K YP +++ IIG N RQVQCISFIA KP Sbjct: 131 MFGCTDATQVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
BLAST of CF834570 vs. ExPASy Swiss-Prot
Match: RBS1_FRIAG (Ribulose bisphosphate carboxylase small chain 1/4, chloroplastic OS=Fritillaria agrestis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.465e-11 Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = -3 Query: 223 MYGCTDAPQVLKEVGEVQKEYPHSFVGIIGLVNKRQVQCISFIAAKP 363 M+GCTDA QV+KE E +KEYP +F+ +IG N RQVQC+SFI +P Sbjct: 132 MFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVERP 178 The following BLAST results are available for this feature:
BLAST of CF834570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834570 ID=CF834570; Name=CF834570; organism=Citrus sinensis; type=EST; length=365bpback to top |