CF834600
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL17_DICDI (60S ribosomal protein L17 OS=Dictyostelium discoideum GN=rpl17 PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.241e-49 Identity = 96/149 (64.43%), Postives = 118/149 (79.19%), Query Frame = -2 Query: 297 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 743 YSK P NP KSCK+RGS+LR+HFKNTRE+A AI+ + LT+AK YL +V+AH++ IPF RF GGVGRT QAK QGRWP KS + IL LL+NAE+NAE KGL+V+ L I+H+QV +AQ+QRRRTYRAHGRINPYM SP +E L+ Sbjct: 6 YSKTPSNPEKSCKSRGSNLRIHFKNTRESAMAIKGMLLTRAKAYLNNVLAHRECIPFRRFKGGVGRTGQAK-IFGTSQGRWPKKSVEHILSLLQNAEANAEAKGLNVEKLKIAHVQVQRAQQQRRRTYRAHGRINPYMCSPSTVEFILT 153
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL17_THEPA (60S ribosomal protein L17 OS=Theileria parva GN=RPL17 PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.957e-46 Identity = 93/149 (62.42%), Postives = 113/149 (75.84%), Query Frame = -2 Query: 306 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 752 MVKYS+EP N T+S KA G+ LRVHFKNT ETA AI+ + + AKRYL DV+ K+ +PF +F GGVGR AQAK + QGRWP KS KF+LDLLKN ESNAEVKGL+ L + H+QVN+A RRR+YRAHGRI P++S PCH+EL Sbjct: 1 MVKYSREPSNLTRSAKAYGAYLRVHFKNTYETATAIKGMLVKDAKRYLNDVIERKRCVPFRKFRGGVGRCAQAK-AFKHTQGRWPEKSCKFLLDLLKNLESNAEVKGLEQSKLRLEHVQVNRAPVGRRRSYRAHGRIIPFLSHPCHVEL 148
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL17_THEAN (60S ribosomal protein L17 OS=Theileria annulata GN=RPL17 PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.167e-46 Identity = 93/149 (62.42%), Postives = 113/149 (75.84%), Query Frame = -2 Query: 306 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 752 MVKYS+EP N T+S KA G+ LRVHFKNT ETA AI+ + + AKRYL DV+ K+ +PF +F GGVGR AQAK + QGRWP KS KF+LDLLKN ESNAEVKGL+ L + H+QVN+A RRR+YRAHGRI P++S PCH+EL Sbjct: 1 MVKYSREPSNLTRSAKAYGAYLRVHFKNTYETATAIKGMLVKDAKRYLNDVIDRKRCVPFRKFRGGVGRCAQAK-AFKHTQGRWPEKSCKFLLDLLKNLESNAEVKGLEQSKLRLEHVQVNRAPVGRRRSYRAHGRIIPFLSHPCHVEL 148
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL17_NEUCR (60S ribosomal protein L17 OS=Neurospora crassa GN=rpl-17 PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.504e-45 Identity = 91/152 (59.87%), Postives = 113/152 (74.34%), Query Frame = -2 Query: 297 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 752 MV+Y+ P KS ++RGS LRV FKNTRETA AI L +A+++LE+V+ K+A+P R+ GG GR AQ K + + RWP KSA+F+L LLKNAE+NA+ KGLD L + HIQVNQA KQRRRTYRAHGRINPYMS+PCHIEL L+ Sbjct: 1 MVRYAATEIAPAKSARSRGSYLRVSFKNTRETAQAINGWKLQRAQKFLENVLEKKEAVPMRRYAGGTGRAAQGK-QFGVSRARWPAKSAEFLLGLLKNAEANADAKGLDTGNLVVKHIQVNQAPKQRRRTYRAHGRINPYMSNPCHIELILT 151
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL17A_YEAST (60S ribosomal protein L17-A OS=Saccharomyces cerevisiae GN=RPL17A PE=1 SV=4) HSP 1 Score: 182.956 bits (463), Expect = 1.964e-45 Identity = 94/152 (61.84%), Postives = 108/152 (71.05%), Query Frame = -2 Query: 297 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 752 M +Y NP KS ARGS LRV FKNTRETA AI LTKA++YLE V+ H++AIPF RF +GRTAQ K + RWP KS KF+ LL+NA +NAE KGLD LY+SHIQVNQA KQRRRTYRAHGRIN Y SSP HIEL ++ Sbjct: 1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVT-KARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVT 151
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL17A_SCHPO (60S ribosomal protein L17-A OS=Schizosaccharomyces pombe GN=rpl17a PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.964e-45 Identity = 93/152 (61.18%), Postives = 109/152 (71.71%), Query Frame = -2 Query: 297 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 752 MV+YS P TK KARG+ LR HFKN+RE A I + L KA +L++V HKQA+PF RF GGVGRTAQ K Q RWPVKS KF DLLKNAE+NAE KGLD+D L I H+QVN A KQRRRTYRAHGR+ Y+SSP HIE+ ++ Sbjct: 1 MVRYSASPALETKCAKARGAYLRTHFKNSREVAFTINGMSLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVKFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVA 151
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL17B_YEAST (60S ribosomal protein L17-B OS=Saccharomyces cerevisiae GN=RPL17B PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 4.375e-45 Identity = 93/152 (61.18%), Postives = 108/152 (71.05%), Query Frame = -2 Query: 297 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 752 M +Y NP KS ARGS LRV FKNTRETA AI LTKA++YL+ V+ H++AIPF RF +GRTAQ K + RWP KS KF+ LL+NA +NAE KGLD LY+SHIQVNQA KQRRRTYRAHGRIN Y SSP HIEL ++ Sbjct: 1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLDQVLDHQRAIPFRRFNSSIGRTAQGKEFGVT-KARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVT 151
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL17B_SCHPO (60S ribosomal protein L17-B OS=Schizosaccharomyces pombe GN=rpl17b PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.273e-44 Identity = 92/152 (60.53%), Postives = 108/152 (71.05%), Query Frame = -2 Query: 297 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 752 MV+YS P TK KARG+ LR HFKN+RE A I + L KA +L++V HKQA+PF RF GGVGRTAQ K Q RWPVKS F DLLKNAE+NAE KGLD+D L I H+QVN A KQRRRTYRAHGR+ Y+SSP HIE+ ++ Sbjct: 1 MVRYSAAPALETKCAKARGAYLRTHFKNSREVAFTINGMNLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVNFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVA 151
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL17_DEBHA (60S ribosomal protein L17 OS=Debaryomyces hansenii GN=RPL17 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.171e-44 Identity = 91/152 (59.87%), Postives = 108/152 (71.05%), Query Frame = -2 Query: 297 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 752 MV+Y+ NP KS ARGS LRV +KNTRETA AI L +A++YL+ V+ H++AIPF RF +GRT Q K + RWP KS FI DLL+N ++NAE KGLD L +SHIQVNQA KQRRRTYRAHGRIN Y SSPCHIEL L+ Sbjct: 1 MVRYAATSANPAKSASARGSYLRVSYKNTRETAQAISGWKLERAQKYLDQVLDHQRAIPFRRFNSSIGRTGQGKEFGVT-KARWPAKSVNFIKDLLRNGQANAESKGLDASKLKVSHIQVNQAPKQRRRTYRAHGRINAYQSSPCHIELILT 151
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL17_ASPFU (60S ribosomal protein L17 OS=Aspergillus fumigatus GN=rpl17 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.250e-44 Identity = 89/151 (58.94%), Postives = 111/151 (73.51%), Query Frame = -2 Query: 297 VKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 749 V+Y+ + KS +ARGS LRV FKNTRETA AI + L +A +LE+V + +PF R+ G +GRTAQ K + + RWPVKSA+F+LDLLKNAE+NA+ KGLD L + HIQVNQA K RRRTYRAHGRINPYM++PCHIEL L+ Sbjct: 9 VRYAAQDIPAAKSARARGSYLRVSFKNTRETAQAINGMKLQRALAFLENVKNKTEVVPFRRYAGSIGRTAQGKQWGVS-KARWPVKSAQFLLDLLKNAEANADTKGLDTGNLIVKHIQVNQAPKGRRRTYRAHGRINPYMTNPCHIELILT 158 The following BLAST results are available for this feature:
BLAST of CF834600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834600 ID=CF834600; Name=CF834600; organism=Citrus sinensis; type=EST; length=870bpback to top |