CF834600
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_SULTO (50S ribosomal protein L22P OS=Sulfolobus tokodaii GN=rpl22p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.518e-13 Identity = 46/148 (31.08%), Postives = 75/148 (50.68%), Query Frame = -2 Query: 300 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 743 Y K + K KA ++ ++ AIR + L AK++L +V+ K+A+PF + G + + GR+P K+ K++L +L+NAE+NA KGLD++ + I HI ++ +R RA GR HIE+ L Sbjct: 6 YPKLDIDENKLAKAVIKNVPASIRDLYNVCKAIRGMKLNDAKQFLNNVLEEKEALPFWKHSHGASHRSNISPKWKVKSGRYPKKAIKYVLKVLENAENNANSKGLDLENVKIVHIAAHKGIILKRYMPRAFGRSTRKYRYTSHIEVIL 153
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_PYRCJ (50S ribosomal protein L22P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl22p PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.518e-13 Identity = 49/139 (35.25%), Postives = 71/139 (51.08%), Query Frame = -2 Query: 306 PTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 722 P + KA + R+ +K + E A I+ + L +AK +LEDV+ K+ IP F A P +WPVK AK L LL+N E+NA+ KGLDV+ L I H ++ K RA GR P+ ++E+ Sbjct: 27 PEQIAKAYAPEQRMSWKKSVEVARFIKGMTLKQAKAWLEDVVKLKRPIPIKTFKKKQAHHATPWEGWP--VAKWPVKVAKRYLQLLENLENNAKFKGLDVERLVIIHAAAHKGIKIPNIMPRAFGRATPFNEETVNVEI 163
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_METTP (50S ribosomal protein L22P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl22p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.518e-13 Identity = 52/156 (33.33%), Postives = 82/156 (52.56%), Query Frame = -2 Query: 297 VKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNG-----QGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 749 + YS P+ + +A G +L + K+ RE AIR + + A+R+L+DV+A K+A+PF R+ V H +G GR+P K+A+ +L +L+NA NAE KGL+ + L I + + + R RA GR P IE+ L+ Sbjct: 4 LNYSITPEG--RFARAMGVELPISPKHAREICRAIRGMKVEAAERFLQDVIALKRAVPFRRYNRNVP--------HRHGLVGWPAGRFPQKAARAVLRVLENAIGNAEYKGLEKERLVIGYANTKKGRTFRGWMPRAMGRATPKNQETVSIEMILT 149
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_SULSO (50S ribosomal protein L22P OS=Sulfolobus solfataricus GN=rpl22p PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13 Identity = 49/149 (32.89%), Postives = 74/149 (49.66%), Query Frame = -2 Query: 300 KYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 746 KY + + K KA D+ ++ AIR + L AK +L V+ K+A+PF R+ G + + GR+P K+ + +L +L+NAE+NA KGLDVD L I HI ++ +R RA GR +IE+ L Sbjct: 5 KYPQLDVDELKIAKAVIRDVPESIRDLYNVCKAIRGMYLNDAKDFLNRVLEEKEALPFWRYNKGASHKSNISAKWKIKAGRYPKKAIRQVLKVLENAEANATNKGLDVDKLIIRHIAAHKGITLQRYMPRAFGRATAKYRRTSNIEVIL 153
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_PICTO (50S ribosomal protein L22P OS=Picrophilus torridus GN=rpl22p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.415e-13 Identity = 43/141 (30.50%), Postives = 78/141 (55.32%), Query Frame = -2 Query: 300 PTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 722 P +S +AR ++ + K+ AH ++ + L AK L++V+ K +P+ R+ V +R G GR+PVK+A+ LL++ +NAE KGL D+L I HI V++ + ++ T +A+GR + ++E+ + Sbjct: 10 PERSARARIREIDISLKDAVNVAHFLKGMDLDSAKNVLDNVIEKKVPVPYFRYMDSV------SHRKGIGPGRYPVKAARAFKKLLEDVSANAEFKGLS-DSLEIVHIAVSKGRMIKKYTPKAYGRAGAFFKDLVNLEVVV 143
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_NITMS (50S ribosomal protein L22P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl22p PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.836e-13 Identity = 48/146 (32.88%), Postives = 78/146 (53.42%), Query Frame = -2 Query: 306 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 743 Y+ + + T+ ++ + + K+ RE A AI+ L + KA+ YL+ V+ +A+ F R+ VG A GR+P K+A+ + +L N ESNAE KG+D+D L I + V++ +R RA GR P + H+EL Sbjct: 6 YAFQNYDATRHVRSSVREKDMSHKHAREVAVAIKGLSIEKARDYLQAVVNKDRAVAFRRYKNQVGHKADPGMM----SGRYPQKTAREFIKVLDNLESNAEYKGMDLDRLKIVNATVHKGVIVKRFIPRAMGRATPKNNVLTHVEL 147
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_METVS (50S ribosomal protein L22P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl22p PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.285e-12 Identity = 51/148 (34.46%), Postives = 73/148 (49.32%), Query Frame = -2 Query: 300 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 743 Y E D P+K+ KA G LR+ K+ E I + L A +L V+A + +PF V K + GR+P K+ + IL +L NA+ NAE KGL+ + L I HI N+ +R RA GR +P HI++ L Sbjct: 6 YKVEAD-PSKTAKAMGRTLRISKKHALEICREINGMKLETAVSFLNRVLALETPVPFKVHNKDV---PHRKGKIGTHAGRFPQKATEEILKVLDNAKKNAEYKGLNTEKLRIKHISSNKGFIIKRFMPRAFGRASPKYQETIHIQVIL 149
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_METB6 (50S ribosomal protein L22P OS=Methanoregula boonei (strain 6A8) GN=rpl22p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.862e-12 Identity = 46/138 (33.33%), Postives = 73/138 (52.90%), Query Frame = -2 Query: 300 KARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNG--QGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 707 + + ++L + K++ E A IR + A YL DV+A K+AIPF F R K P GR+PVK++K + +L++ + NAE GLD + L I H N+ + Q+ RA GR +P + +IE+ + Sbjct: 17 RGKANELSISPKHSIEIADFIRHQRVNDALAYLADVVALKKAIPFRHF----NRNVAHKRGLPGNWDAGRYPVKASKAYIRILESIKKNAEYTGLDTENLEIIHASANRGRAQKAYFPRAMGRASPKVRETVNIEIVV 150
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_METMP (50S ribosomal protein L22P OS=Methanococcus maripaludis GN=rpl22p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12 Identity = 49/150 (32.67%), Postives = 74/150 (49.33%), Query Frame = -2 Query: 300 VKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 749 +KY E D P + +A G LR+ K+ E + + L A YL V+A + +PF + K + GR+P K++ IL++L NA+ NAE KGL+ + L I HI N+ +R RA GR +P HI++ L Sbjct: 4 LKYKVEAD-PKNTARAMGRTLRISRKHAIELCRELSGMKLDAAVAYLNRVIALETPVPFKVHNKDL---PHRKGKIGTHSGRFPQKASLEILNVLDNAKKNAEQKGLNTEKLRIKHISSNRGFTIKRYMPRAFGRASPKNQETIHIQVIL 149
BLAST of CF834600 vs. ExPASy Swiss-Prot
Match: RL22_METM7 (50S ribosomal protein L22P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl22p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12 Identity = 49/150 (32.67%), Postives = 73/150 (48.67%), Query Frame = -2 Query: 300 VKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 749 +KY E D P + +A G LR+ K+ E + + L A YL V+A + +PF + K + GR+P K++ IL +L NA+ NAE KGL+ + L I HI N+ +R RA GR +P HI++ L Sbjct: 4 LKYKVEAD-PKNTARAMGRTLRISRKHAIELCRELSGMKLDAAVAYLNRVIALETPVPFKVHNKDL---PHRKGKIGTHSGRFPQKASLEILQVLDNAKKNAEQKGLNTEKLRIKHISSNRGFTIKRYMPRAFGRASPKNQETIHIQVIL 149 The following BLAST results are available for this feature:
BLAST of CF834600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834600 ID=CF834600; Name=CF834600; organism=Citrus sinensis; type=EST; length=870bpback to top |