CF834601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_LONON (60S ribosomal protein L17 OS=Lonomia obliqua GN=RpL17 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.852e-27 Identity = 62/96 (64.58%), Postives = 74/96 (77.08%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 M +YS++P+NP KSCKARGS+LRVHFKNT ETA AIRK+PL +A RYL++V K+ IPF RF GGVGR A AK + QGRWP KSA+F L LL Sbjct: 1 MGRYSRDPENPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAK-QFGTTQGRWPKKSAEFPLQLL 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_BIPLU (60S ribosomal protein L17 OS=Biphyllus lunatus GN=RpL17 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.852e-27 Identity = 61/96 (63.54%), Postives = 75/96 (78.12%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 M +Y++EPDN KSCKARGS+LRVHFKNT ETA+AIRK+PL +A YL++V A K+ +PF RF GGVGR A AK + QGRWP KSA+F+L LL Sbjct: 1 MGRYAREPDNAGKSCKARGSNLRVHFKNTCETANAIRKMPLKRAVAYLKNVTAQKECVPFRRFNGGVGRCAQAK-QFGTTQGRWPKKSAEFLLQLL 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_CAEEL (60S ribosomal protein L17 OS=Caenorhabditis elegans GN=rpl-17 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27 Identity = 59/97 (60.82%), Postives = 71/97 (73.20%), Query Frame = 2 Query: 422 TMVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 T V YS+ P+N TKSCKARGSDLRVHFKNT E A A+R +PL +A+ +L V HK+ +PF RF GG+GR A K + QGRWPVKSA F+LDLL Sbjct: 2 TKVHYSRAPENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRFHGGIGRAAQTKQWNTT-QGRWPVKSADFLLDLL 97
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_HUMAN (60S ribosomal protein L17 OS=Homo sapiens GN=RPL17 PE=1 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 1.121e-26 Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 MV+YS +P+NPTKSCK+RGS+LRVHFKNTRETA AI+ + + KA +YL+DV KQ +PF R+ GGVGR A AK + QGRWP KSA+F+L +L Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHML 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_FELCA (60S ribosomal protein L17 OS=Felis catus GN=RPL17 PE=2 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 1.121e-26 Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 MV+YS +P+NPTKSCK+RGS+LRVHFKNTRETA AI+ + + KA +YL+DV KQ +PF R+ GGVGR A AK + QGRWP KSA+F+L +L Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHML 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_ARGMO (60S ribosomal protein L17 OS=Argas monolakensis GN=RpL17 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.121e-26 Identity = 61/96 (63.54%), Postives = 75/96 (78.12%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 M +YS EPDN TKSCKARGS+LRVHFKNTRETA AI+++ L +A+RYL++V+A K+ +PF RF GGVGR A AK QGRWP KSA+F+ LL Sbjct: 1 MGRYSVEPDNATKSCKARGSNLRVHFKNTRETAQAIKRMSLRRAQRYLKNVIAKKEIVPFRRFNGGVGRKAQAK-AWGCTQGRWPKKSAEFLWQLL 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_ANOGA (60S ribosomal protein L17 OS=Anopheles gambiae GN=RpL17 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.121e-26 Identity = 58/96 (60.42%), Postives = 77/96 (80.21%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 M +Y+KEPDN +KSCK+RGS+LRVHFKNTRETA AI+++PL +A+R+L++V+ K+ +PF RF GGVGR A AK+ GRWP KSA+F+L LL Sbjct: 1 MGRYAKEPDNASKSCKSRGSNLRVHFKNTRETALAIKRMPLRRAQRFLKNVIEKKECVPFRRFNGGVGRCAQAKH-WGTSVGRWPKKSAEFLLQLL 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_RAT (60S ribosomal protein L17 OS=Rattus norvegicus GN=Rpl17 PE=2 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 1.464e-26 Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 MV+YS +P+NPTKSCK+RGS+LRVHFKNTRETA AI+ + + KA +YL+DV KQ +PF R+ GGVGR A AK + QGRWP KSA+F+L +L Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHML 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_MOUSE (60S ribosomal protein L17 OS=Mus musculus GN=Rpl17 PE=2 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 1.464e-26 Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 MV+YS +P+NPTKSCK+RGS+LRVHFKNTRETA AI+ + + KA +YL+DV KQ +PF R+ GGVGR A AK + QGRWP KSA+F+L +L Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHML 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_BOVIN (60S ribosomal protein L17 OS=Bos taurus GN=RPL17 PE=2 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 1.464e-26 Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 MV+YS +P+NPTKSCK+RGS+LRVHFKNTRETA AI+ + + KA +YL+DV KQ +PF R+ GGVGR A AK + QGRWP KSA+F+L +L Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHML 95 The following BLAST results are available for this feature:
BLAST of CF834601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834601 ID=CF834601; Name=CF834601; organism=Citrus sinensis; type=EST; length=712bpback to top |