CF834601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_THEPA (60S ribosomal protein L17 OS=Theileria parva GN=RPL17 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.986e-24 Identity = 58/96 (60.42%), Postives = 70/96 (72.92%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 MVKYS+EP N T+S KA G+ LRVHFKNT ETA AI+ + + AKRYL DV+ K+ +PF +F GGVGR A AK + QGRWP KS KF+LDLL Sbjct: 1 MVKYSREPSNLTRSAKAYGAYLRVHFKNTYETATAIKGMLVKDAKRYLNDVIERKRCVPFRKFRGGVGRCAQAK-AFKHTQGRWPEKSCKFLLDLL 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_THEAN (60S ribosomal protein L17 OS=Theileria annulata GN=RPL17 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24 Identity = 58/96 (60.42%), Postives = 70/96 (72.92%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 MVKYS+EP N T+S KA G+ LRVHFKNT ETA AI+ + + AKRYL DV+ K+ +PF +F GGVGR A AK + QGRWP KS KF+LDLL Sbjct: 1 MVKYSREPSNLTRSAKAYGAYLRVHFKNTYETATAIKGMLVKDAKRYLNDVIDRKRCVPFRKFRGGVGRCAQAK-AFKHTQGRWPEKSCKFLLDLL 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_PECGU (60S ribosomal protein L17 OS=Pectinaria gouldii GN=rpl-17 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23 Identity = 52/96 (54.17%), Postives = 67/96 (69.79%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 M +Y P+NP + CKA+G++ RVH+KNT ET AI+ + L KA+ YL +V+ HKQ IPF R GGVGR A AKN + QGRWP KS +F+L LL Sbjct: 1 MARYKFNPENPNRVCKAKGTNFRVHYKNTSETGRAIKGMHLHKARSYLSNVVEHKQCIPFRRHKGGVGRCAQAKNFNTT-QGRWPKKSCEFMLQLL 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17A_SCHPO (60S ribosomal protein L17-A OS=Schizosaccharomyces pombe GN=rpl17a PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21 Identity = 54/96 (56.25%), Postives = 62/96 (64.58%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 MV+YS P TK KARG+ LR HFKN+RE A I + L KA +L++V HKQA+PF RF GGVGRTA K Q RWPVKS KF DLL Sbjct: 1 MVRYSASPALETKCAKARGAYLRTHFKNSREVAFTINGMSLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVKFFYDLL 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17A_YEAST (60S ribosomal protein L17-A OS=Saccharomyces cerevisiae GN=RPL17A PE=1 SV=4) HSP 1 Score: 98.2117 bits (243), Expect = 4.561e-20 Identity = 52/96 (54.17%), Postives = 61/96 (63.54%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 M +Y NP KS ARGS LRV FKNTRETA AI LTKA++YLE V+ H++AIPF RF +GRTA K + RWP KS KF+ LL Sbjct: 1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVT-KARWPAKSVKFVQGLL 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17B_SCHPO (60S ribosomal protein L17-B OS=Schizosaccharomyces pombe GN=rpl17b PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20 Identity = 53/96 (55.21%), Postives = 61/96 (63.54%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 MV+YS P TK KARG+ LR HFKN+RE A I + L KA +L++V HKQA+PF RF GGVGRTA K Q RWPVKS F DLL Sbjct: 1 MVRYSAAPALETKCAKARGAYLRTHFKNSREVAFTINGMNLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVNFFYDLL 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17B_YEAST (60S ribosomal protein L17-B OS=Saccharomyces cerevisiae GN=RPL17B PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.016e-19 Identity = 51/96 (53.12%), Postives = 61/96 (63.54%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 M +Y NP KS ARGS LRV FKNTRETA AI LTKA++YL+ V+ H++AIPF RF +GRTA K + RWP KS KF+ LL Sbjct: 1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLDQVLDHQRAIPFRRFNSSIGRTAQGKEFGVT-KARWPAKSVKFVQGLL 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_DEBHA (60S ribosomal protein L17 OS=Debaryomyces hansenii GN=RPL17 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.467e-18 Identity = 49/96 (51.04%), Postives = 61/96 (63.54%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 MV+Y+ NP KS ARGS LRV +KNTRETA AI L +A++YL+ V+ H++AIPF RF +GRT K + RWP KS FI DLL Sbjct: 1 MVRYAATSANPAKSASARGSYLRVSYKNTRETAQAISGWKLERAQKYLDQVLDHQRAIPFRRFNSSIGRTGQGKEFGVT-KARWPAKSVNFIKDLL 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_NEUCR (60S ribosomal protein L17 OS=Neurospora crassa GN=rpl-17 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.269e-18 Identity = 47/96 (48.96%), Postives = 64/96 (66.67%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 MV+Y+ P KS ++RGS LRV FKNTRETA AI L +A+++LE+V+ K+A+P R+ GG GR A K + + RWP KSA+F+L LL Sbjct: 1 MVRYAATEIAPAKSARSRGSYLRVSFKNTRETAQAINGWKLQRAQKFLENVLEKKEAVPMRRYAGGTGRAAQGK-QFGVSRARWPAKSAEFLLGLL 95
BLAST of CF834601 vs. ExPASy Swiss-Prot
Match: RL17_ASPFU (60S ribosomal protein L17 OS=Aspergillus fumigatus GN=rpl17 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.622e-17 Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 2 Query: 428 VKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAXAKNRHPNGQGRWPVKSAKFILDLL 712 V+Y+ + KS +ARGS LRV FKNTRETA AI + L +A +LE+V + +PF R+ G +GRTA K + + RWPVKSA+F+LDLL Sbjct: 9 VRYAAQDIPAAKSARARGSYLRVSFKNTRETAQAINGMKLQRALAFLENVKNKTEVVPFRRYAGSIGRTAQGK-QWGVSKARWPVKSAQFLLDLL 102 The following BLAST results are available for this feature:
BLAST of CF834601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834601 ID=CF834601; Name=CF834601; organism=Citrus sinensis; type=EST; length=712bpback to top |