CF834610
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834610 vs. ExPASy Swiss-Prot
Match: RBS1_HYDMR (Ribulose bisphosphate carboxylase small chain 1 OS=Hydrogenovibrio marinus GN=cbbS-1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.346e-13 Identity = 40/102 (39.22%), Postives = 54/102 (52.94%), Query Frame = -1 Query: 328 KKFETLSYLPPLSDEALLKEINSLIRSGWIPCLEFELEKGWVYREPHKSPG*YDGRYWTMWKLPMYGCTDAPQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 633 +K ET SYLP ++ + + ++ +I GW P +E H P YW MWKLPM+G TDA VL EV K P++ VR+IG+DN Q Q Sbjct: 17 RKAETFSYLPKMTTDQIKAQVEYIISKGWNPAIE------------HSEPENAFSYYWYMWKLPMFGDTDANVVLAEVDACIKANPNNHVRLIGYDNYAQSQ 106
BLAST of CF834610 vs. ExPASy Swiss-Prot
Match: RBS_NITVU (Ribulose bisphosphate carboxylase small chain OS=Nitrobacter vulgaris GN=cbbS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.370e-13 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = -1 Query: 313 LKKFETLSYLPPLSDEALLKEINSLIRSGWIPCLEFELEKGWVYREPHKSPG*YDGRYWTMWKLPMYGCTDAPQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFI 636 LKK+ET SYLP ++ E + ++I I GW P +E EKG P K+ YW MWKLP++G V+ E+ +E+P VR + +DN Q Q ++F+ Sbjct: 9 LKKYETFSYLPQMTPEQVRRQIAHAIAQGWNPAVE-HTEKG----TPAKAS------YWYMWKLPLFGEQSVDAVVAEIEACHREFPDQMVRFVAYDNYAQSQGMAFV 105
BLAST of CF834610 vs. ExPASy Swiss-Prot
Match: RBS_RHOCA (Ribulose bisphosphate carboxylase small chain OS=Rhodobacter capsulatus GN=cbbS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.310e-12 Identity = 37/114 (32.46%), Postives = 57/114 (50.00%), Query Frame = -1 Query: 292 KKFETLSYLPPLSDEALLKEINSLIRSGWIPCLEFELEKGWVYREPHKSPG*YDGRYWTMWKLPMYGCTDAPQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPGV 633 +K T SYLPP+ + + +++ ++++GW P +E H P YW MWKLPM+G TD +L E+ + P VR+IG+DN Q Q + I + V Sbjct: 17 RKMGTFSYLPPMGEAEIRRQVEWIVKNGWNPGIE------------HTEPDFAAQIYWYMWKLPMFGETDVDAILAELKACHEANPGHHVRLIGYDNFTQSQGANMIVYRGTAV 118
BLAST of CF834610 vs. ExPASy Swiss-Prot
Match: RBS1_THIFE (Ribulose bisphosphate carboxylase small chain 1 OS=Thiobacillus ferrooxidans GN=cbbS1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.241e-12 Identity = 37/106 (34.91%), Postives = 53/106 (50.00%), Query Frame = -1 Query: 313 KFETLSYLPPLSDEALLKEINSLIRSGWIPCLEFELEKGWVYREPHKSPG*YDGRYWTMWKLPMYGCTDAPQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFI 630 K+ET SYLP + E + ++I LI GW P +E H P YW MWKLPM+G V+ E+ + +P VR++G+DN Q Q +F+ Sbjct: 12 KYETFSYLPAMGPEKMRRQIAYLINQGWNPGIE------------HVEPERASTYYWYMWKLPMFGEQSVDTVIMELEACHRAHPGHHVRLVGYDNYSQSQGSAFV 105 The following BLAST results are available for this feature:
BLAST of CF834610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834610 ID=CF834610; Name=CF834610; organism=Citrus sinensis; type=EST; length=732bpback to top |