CF834649
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 8.077e-28 Identity = 72/197 (36.55%), Postives = 98/197 (49.75%), Query Frame = -1 Query: 149 GFGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGY-CYIRQVSPASSDXXXXXXXXP--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 727 GF N KREIAAFFA HET G+ CYI +++ A+ D PG+ YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM N+V+ G+G T ING +EC AV R+ ++ +C +FG+ PG NL C Sbjct: 124 GFANDRTNDDSKREIAAFFAHVTHET--------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.874e-26 Identity = 65/195 (33.33%), Postives = 97/195 (49.74%), Query Frame = -1 Query: 149 GFGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 727 GF + G++ KREIAAFFA HET +CYI +++ +++ D +YYGRGP+Q++WN NY G A+G D L +P +A D V++FK+A+WFWM S H V+ G+G TT + +ECG + R+G++ +C + G+ PG NL C Sbjct: 109 GFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.092e-24 Identity = 68/196 (34.69%), Postives = 93/196 (47.45%), Query Frame = -1 Query: 149 FGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ----YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 724 FG G+E KREIAA FA HET +CYI ++ AS D P Y+GRGPIQL+WN NY G A D L P+ ++ D V+SFK+A+W+WM Q +P ++ G+G T ING +EC V+ R+ ++T +C + G+ GDNL C Sbjct: 109 FGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.862e-24 Identity = 66/195 (33.85%), Postives = 100/195 (51.28%), Query Frame = -1 Query: 149 FGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXP--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 724 F N N R REIA FA HET +CYI +++ AS D PG+ Y+GRGPIQL+WN NY CG++L ++LL P++++ +P ++F++ +WFWM + P ++++ G+G T IN G+EC + AV RI ++ +CG+ G+ PG NL C Sbjct: 110 FPNFANSVTR-REIATMFAHFTHET-------------GHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAIN-GMECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.176e-24 Identity = 63/195 (32.31%), Postives = 95/195 (48.72%), Query Frame = -1 Query: 149 GFGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 727 GF + G E KREIAAFFA HET +CYI +++ +++ D +YYGRGP+Q++WN NY G +G + L +P+ +A D V++FK+A+WFWM N+V+ G+G T ING +EC + R+G++ +C + + PG NL C Sbjct: 120 GFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = -1 Query: 245 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 382 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of CF834649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834649 ID=CF834649; Name=CF834649; organism=Citrus sinensis; type=EST; length=727bpback to top |