CF834662

Overview
NameCF834662
Unique NameCF834662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BIFLO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum GN=metE PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.998e-22
Identity = 62/188 (32.98%), Postives = 99/188 (52.66%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG-TKTLELI-KSGFPAGKYLFAGVVDGRNIWANDLA 559
            ++VPE+    +    S K   E+ EAK LG++T PV IGP ++L L++  +                    EV+++    GA+W+Q DEP LV+D +   +  F   Y ++ S    + VL+ TYF  + A+ ++T+ +L G    G DL  G  + LE + K G  +   +FAGV++GRNIW N+ A
Sbjct:  125 YLVPEVESAAEIKLNSTKPFDEFNEAKALGIDTKPVFIGPYTFLKLARTPEATELELDKGLVNAVAAVYV-EVLAKFNELGAAWVQLDEPYLVLDKEPGDVELFKTLYTKILSAKGNVKVLLNTYFGHI-ADVYETV-NLLGFDGIGLDLNEGREENLEAVAKYGVASNTTIFAGVINGRNIWRNNYA 309          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BIFLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum (strain DJO10A) GN=metE PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.998e-22
Identity = 62/188 (32.98%), Postives = 99/188 (52.66%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG-TKTLELI-KSGFPAGKYLFAGVVDGRNIWANDLA 559
            ++VPE+    +    S K   E+ EAK LG++T PV IGP ++L L++  +                    EV+++    GA+W+Q DEP LV+D +   +  F   Y ++ S    + VL+ TYF  + A+ ++T+ +L G    G DL  G  + LE + K G  +   +FAGV++GRNIW N+ A
Sbjct:  125 YLVPEVESAAEIKLNSTKPFDEFNEAKALGIDTKPVFIGPYTFLKLARTPEATELELDKGLVNAVAAVYV-EVLAKFNELGAAWVQLDEPYLVLDKEPGDVELFKTLYTKILSAKGNVKVLLNTYFGHI-ADVYETV-NLLGFDGIGLDLNEGREENLEAVAKYGVASNTTIFAGVINGRNIWRNNYA 309          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BIFA0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=metE PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.998e-22
Identity = 69/189 (36.51%), Postives = 98/189 (51.85%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAE-LESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG-TKTLELIK-SGFPAGKYLFAGVVDGRNIWANDLA 559
            ++VPE     +      K   EY EAK LG+ET PVLIGP ++L LS+ A+    T               EV+      GA W+Q DEP LV+D     +  F   Y+  L +  SG+ VL+ TYF ++ A+ ++T+  L      G DL+ G  + L+ ++  G  A   LFAGVV+GRNIW N+ A
Sbjct:  125 YLVPEFDSSTEVRLNGTKPFDEYLEAKSLGIETKPVLIGPYTFLKLSRDAEAQELTI-DEGLVDAVADVYAEVLRRFAKLGAQWVQLDEPYLVLDKHEGDVSLFKSLYSRLLPARDSGVRVLLNTYFGNI-ADIYETV-KLFEFDGVGLDLIEGRDENLKAVEHHGVAARTTLFAGVVNGRNIWRNNYA 310          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_MYCPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium paratuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.222e-22
Identity = 70/186 (37.63%), Postives = 91/186 (48.92%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            +IVPE+ P  KF+    K ++E KEA   G+   PV+IGP+++LLLSK   G                   E++S L   GA W+Q DEP LV D+ +         Y +L S  +   + V TYF D P  +   L     V A G DLV G  T         AGK + AGVVDGRN+W  DLA
Sbjct:  122 YIVPEIAPTTKFALNPDKVLSELKEALAQGIPARPVVIGPITFLLLSKGVDGAGAPI---ERLEELVPIYAELLSLLADNGAQWVQLDEPALVTDMCADAPALAEAVYNKLGSASNRPAIYVATYFGD-PGASLAGLARTP-VEAIGVDLVYGPDTAVAAVPEL-AGKTVVAGVVDGRNVWRTDLA 301          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_MYCA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium avium (strain 104) GN=metE PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.222e-22
Identity = 71/186 (38.17%), Postives = 92/186 (49.46%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            +IVPE+ P  KF+    K ++E KEA   G+   PV+IGP+++LLLS   KGV                  E++S L   GA W+Q DEP LV D+ +         Y +L S  +   + V TYF D P  +   L     V A G DLV G  T         AGK + AGVVDGRN+W  DLA
Sbjct:  122 YIVPEIAPTTKFALNPDKVLSELKEALAQGIPARPVVIGPITFLLLS---KGVDGAGGPIERLEELVPIYAELLSLLADNGAQWVQLDEPALVTDMCADAPALAEAVYNKLGSAANRPAIYVATYFGD-PGASLAGLARTP-VEAIGVDLVYGPDTAVAAVPEL-AGKTVVAGVVDGRNVWRTDLA 301          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BURPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=metE PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.820e-22
Identity = 68/185 (36.76%), Postives = 88/185 (47.57%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPELGP   F         E  EA  L +   PVLIGP++YL LS   K     F               ++ +LK  G  W+Q DEP L +DL    L AFS AY  L +  SG+ VL+ TYF      A     ++  V     DLVR  + L+  ++  P    L AGV+DGRNIW  DL
Sbjct:  120 YLVPELGPQTTFDGGVEWLFDEIDEALALNLPVKPVLIGPITYLWLS---KSHVAGFDRLSLLPKLVIRYSRLLEKLKQRGIEWVQLDEPALCVDLPVEWLDAFSAAYDVLGT--SGVKVLLATYFESAAEHA--PRVAVLPVAGVHLDLVRAPQQLDAWRAALPKHAVLSAGVIDGRNIWRADL 297          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_RHOSR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodococcus sp. (strain RHA1) GN=metE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.163e-21
Identity = 64/185 (34.59%), Postives = 92/185 (49.73%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE+ P   F+    K + E +EA+ L +   PV++GPV++LLLS   K V                  +++  L  AGA W+Q DEP LV D +  ++ A   AY  L        +LV +YF  +  +A   + S  GV     DLV G+ TL  +       K++ AGVVDGRNIW  DL
Sbjct:  121 YLVPEISPTTTFALDPSKVLRELEEARALDIPARPVVVGPVTFLLLS---KAVGSDAPLLDRLDELVPLYADLLGRLAGAGADWVQIDEPALVADRNPKEIAAAKRAYDRLSGLELRPAILVASYFGSL-GDALPAIAS-TGVEGIAIDLVAGSDTLATVPD--LTRKHVVAGVVDGRNIWRTDL 298          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_BRAJA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bradyrhizobium japonicum GN=metE PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.163e-21
Identity = 62/185 (33.51%), Postives = 94/185 (50.81%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPE      F   S K V EY+EA+ LG +T PVLIGPV++L   K  K     F              +++ EL   GASW+QFDEP LV+DLD    ++   AY         + +++ +YF  +  +   T  SL  ++    DLVR  + L+ I +   +   +  GV+DGRN+W ++L
Sbjct:  139 YMVPEFYRGQAFRLCSRKPVEEYEEARALGFQTRPVLIGPVTFL---KLGKSTDSAFQPLSLLDDLIPVYIDLLHELAKRGASWVQFDEPCLVLDLDEAARNSLLHAYNRFAKEGPAIKIMLASYFGAL-GDNLDTALSLP-ISGLHVDLVRAPELLDQIVADGRSDLVMSLGVIDGRNVWRSNL 318          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_METCA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Methylococcus capsulatus GN=metE PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.519e-21
Identity = 66/185 (35.68%), Postives = 89/185 (48.11%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            +IVPE   +  F   +     E +EAK L +   PVLIGP++YL L K  +     F               ++  L A+G  W+Q DEP+L MDL    L AF+ AYA L    +G  +L+ TYFA V   A    +S   V     D VR  + +      FPA K L  G++DGRN+W  DL
Sbjct:  120 YIVPEFDRETGFGPGTEWLFDEVEEAKALRLNPKPVLIGPLTYLHLGKERQA---GFSRLELLPRLLPAYAAILRRLHASGVPWVQMDEPILGMDLPPEWLEAFAPAYAALAE--AGPKLLLATYFASVAEHAVWLKSS--AVAGLHIDAVRAPEQVADFLKDFPADKVLSLGLIDGRNVWRTDL 297          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_SCHPO (Probable 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Schizosaccharomyces pombe GN=SPAC9.09 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.984e-21
Identity = 67/187 (35.83%), Postives = 97/187 (51.87%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLV-ETYFADVPAEAFQTLTSLKGVTAYG--FDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWAND 553
            F+ PE+  +  F  +S KA+ E+ EAK  G+ T PVL+GPV+YL ++K AKG   +               E+I +L  AGA +IQ DEP+L +DL    L ++ EAY     TL  +  L+  TYF  + + A      LKG+   G   D+VR  + L+   +     + +  GVV GRNIW  D
Sbjct:  129 FLRPEVSEETDFKLSSTKALDEFLEAKEAGIITRPVLVGPVTYLFIAKAAKG--SSIKPIELLPKLLPVYVELIKKLTEAGAEYIQIDEPILTLDLPQEILASYKEAY----ETLGKIGKLILTTYFGSLQSNA----DVLKGLPIAGVHVDVVRAPENLDRALAVLGENQIISVGVVSGRNIWKTD 305          
The following BLAST results are available for this feature:
BLAST of CF834662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
METE_BIFLO3.998e-2232.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLD3.998e-2232.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFA03.998e-2236.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCPA5.222e-2237.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCA15.222e-2238.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPP6.820e-2236.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOSR1.163e-2134.595-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BRAJA1.163e-2133.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_METCA1.519e-2135.685-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SCHPO1.984e-2135.83Probable 5-methyltetrahydropteroyltriglutamate--ho... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834662 ID=CF834662; Name=CF834662; organism=Citrus sinensis; type=EST; length=560bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCTGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCGAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCATGCATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTG
GCTTGAATGTTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCA
TTCCAGACCCTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTT
GGTTCGTGGAACGAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTG
GCAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAAT
GATCTTGCTG
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