CF834682
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_LISIN (Nucleoside diphosphate kinase OS=Listeria innocua GN=ndk PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.169e-41 Identity = 80/147 (54.42%), Postives = 109/147 (74.15%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 490 MEQT++M+KPDGV+RGL+GEI+ + EKKG L KLM +DR AE+HY + KPFF LI +ITSGPV AM+ EG+ V+KT R ++G TNP ++ PGTIR + AI T RN+IHGSDS ESA++EI L+F P ++++ ++ WI Sbjct: 1 MEQTYVMVKPDGVERGLIGEIVAKIEKKGIKLVAGKLMQIDRTLAEQHYAEHIGKPFFEDLIGFITSGPVFAMVLEGDDVIKTARRMMGKTNPLEADPGTIRAEYAIHTNRNVIHGSDSPESAKREIQLFFEPHEILSYEKAVDTWI 147
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_LISMH (Nucleoside diphosphate kinase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=ndk PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.751e-41 Identity = 80/147 (54.42%), Postives = 107/147 (72.79%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 490 MEQT++M+KPDGV+RGL+GEI+ R EKKG + KLM +DR AEKHY + K FF LI +ITSGPV AM+ EG+ + T R ++G TNP ++ PGTIR D AI T RN+IHGSDS+ESA++EI L+F P +++Q ++ WI Sbjct: 1 MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSLESAKREIQLFFAPQEILSYQKAIDTWI 147
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_DESHY (Nucleoside diphosphate kinase OS=Desulfitobacterium hafniense (strain Y51) GN=ndk PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.152e-40 Identity = 81/149 (54.36%), Postives = 108/149 (72.48%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 496 ME+TFIM+KPD VQRGLVG+II RFE KG L G+KLM+VD+ AE+HY + K FF ++YI S PVVAM+WEG+ VV R ++GATNPA + PG+IRG + RN+IHGSDSV SA++EIAL+F P+ +++ + W+ E Sbjct: 1 MEKTFIMLKPDAVQRGLVGQIIARFETKGCKLVGMKLMSVDQALAEQHYAEHKGKSFFEPTVQYIMSSPVVAMVWEGKNVVALARELMGATNPANANPGSIRGSFGMDISRNVIHGSDSVASAEREIALYFRPEELCDYRKAGEEWLSE 149
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_DESHD (Nucleoside diphosphate kinase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=ndk PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.152e-40 Identity = 81/149 (54.36%), Postives = 108/149 (72.48%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 496 ME+TFIM+KPD VQRGLVG+II RFE KG L G+KLM+VD+ AE+HY + K FF ++YI S PVVAM+WEG+ VV R ++GATNPA + PG+IRG + RN+IHGSDSV SA++EIAL+F P+ +++ + W+ E Sbjct: 1 MEKTFIMLKPDAVQRGLVGQIIARFEAKGCKLVGMKLMSVDQALAEQHYAEHKGKSFFEPTVQYIMSSPVVAMVWEGKNVVALARELMGATNPANANPGSIRGSFGMDISRNVIHGSDSVASAEREIALYFRPEELCDYRKAGEEWLSE 149
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_LISMF (Nucleoside diphosphate kinase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=ndk PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.504e-40 Identity = 80/147 (54.42%), Postives = 106/147 (72.11%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 490 MEQT++M+KPDGV+RGL+GEI+ R EKKG + KLM +DR AEKHY + K FF LI +ITSGPV AM+ EG+ + T R ++G TNP ++ PGTIR D AI T RN+IHGSDS ESA++EI L+F P +++Q ++ WI Sbjct: 1 MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSPESAKREIQLFFAPQEILSYQKAIDTWI 147
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_LISMC (Nucleoside diphosphate kinase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=ndk PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.964e-40 Identity = 79/147 (53.74%), Postives = 106/147 (72.11%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 490 MEQT++M+KPDGV+RGL+GEI+ R EKKG + KLM +DR AEKHY + K FF LI +ITSGPV AM+ EG+ + T R ++G TNP ++ PGTIR D A+ T RN+IHGSDS ESA++EI L+F P +++Q ++ WI Sbjct: 1 MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAVHTNRNVIHGSDSPESAKREIQLFFAPQEILSYQKAIDTWI 147
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_HALMA (Nucleoside diphosphate kinase OS=Haloarcula marismortui GN=ndk PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.351e-40 Identity = 75/154 (48.70%), Postives = 108/154 (70.13%), Query Frame = 2 Query: 44 LKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESA--QKEIALWFPDGP-INWQSSLHPWIYE 496 + E E+TF+M+KPDGVQRGL+G+I+ RFE +G + G K M +D+ AE+HY + KPFF L+++ITSGPV AM+WEG+ + RT++G T+PA+SAPGTIRGD + GRN+IHGSD + ++EI L+F + ++W W+YE Sbjct: 1 MSEHERTFVMVKPDGVQRGLIGDIVSRFEDRGLKMVGGKFMQIDQELAEEHYGEHEDKPFFDGLVDFITSGPVFAMVWEGQDATRQVRTMMGETDPAESAPGTIRGDYGLDLGRNVIHGSDHEDEGANEREIELFFDEAELVDWDQIDSSWLYE 154
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDKM_HUMAN (Nucleoside diphosphate kinase, mitochondrial OS=Homo sapiens GN=NME4 PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.351e-40 Identity = 77/149 (51.68%), Postives = 107/149 (71.81%), Query Frame = 2 Query: 56 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INW-----QSSLHP 484 E+T + +KPDGVQR LVG++I RFE++GF+L G+K++ +HY+DL KPF+ +LI Y++SGPVVAM+WEG VV+ R +IG T+ A++APGTIRGD ++ RN+IH SDSVE AQ+EI LWF ++W SS+HP Sbjct: 38 ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLWFQSSELVSWADGGQHSSIHP 186
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_UNCMA (Nucleoside diphosphate kinase OS=Uncultured methanogenic archaeon RC-I GN=ndk PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.273e-39 Identity = 77/150 (51.33%), Postives = 108/150 (72.00%), Query Frame = 2 Query: 50 EMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSL-HPWIYE 496 E E+TF+M+KPDGVQRGLVGEII RFE++G + G+K++ V A++HY + ++KPFF L+ +I SGP VAM+ EG+ V R+++G T P +SAPGTIRGD A+ GRN+IH SDS ESA++EI+L+F I + + W+YE Sbjct: 3 ERERTFVMVKPDGVQRGLVGEIISRFERRGLKIVGMKMLEVSEELAKQHYAEHAAKPFFPGLVSFIRSGPTVAMVIEGKDAVSMVRSMLGKTKPIESAPGTIRGDFALDMGRNVIHASDSPESAKREISLYFKTSEIATYARIDEQWLYE 152
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_NATPD (Nucleoside diphosphate kinase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=ndk PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.273e-39 Identity = 78/153 (50.98%), Postives = 108/153 (70.59%), Query Frame = 2 Query: 44 LKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVE-SAQKEIALWFPDGPI-NWQSSLHPWIYE 496 + + E+TF+M+KPDGVQRGL+G+I+ RFE +G L K M +D A +HY + KPFF L E+ITSGPV AM+WEG+ V RT++G T+PA+SAPGTIRGD + GRN+IHGSD+ SA++EI L+F D + +++ PW+YE Sbjct: 1 MADTERTFVMVKPDGVQRGLIGDIVSRFEDRGLKLVAGKFMQIDDELAREHYAEHVDKPFFDELKEFITSGPVFAMVWEGQDAVAQVRTMMGETDPAESAPGTIRGDFGLDLGRNVIHGSDTEPGSAEREIGLFFDDDELQDYERIDEPWLYE 153 The following BLAST results are available for this feature:
BLAST of CF834682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834682 ID=CF834682; Name=CF834682; organism=Citrus sinensis; type=EST; length=648bpback to top |