CF834682
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_AGRT5 (Nucleoside diphosphate kinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ndk PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.246e-27 Identity = 61/136 (44.85%), Postives = 82/136 (60.29%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 460 +E+TF MIKPD +R L G I FE G + K + + + AE Y +PFFG L+E +TSGP + + EGE + R I+GATNPAQ+A GTIR A+ G N +HGSD+ E+A +EIA WF + I Sbjct: 3 IERTFSMIKPDATKRNLTGAITKVFEDNGLRIVASKRVWMSKREAEGFYAVHKERPFFGELVEGMTSGPTIVQVLEGENAILKNREIMGATNPAQAAEGTIRKSFALSIGENSVHGSDAPETAAQEIAYWFAETEI 138
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_VIBHB (Nucleoside diphosphate kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=ndk PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.464e-27 Identity = 58/136 (42.65%), Postives = 85/136 (62.50%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 460 +E+TF ++KPD V+R L+GEI R EK G + K++ + A Y + KPFF +L E++TSGP++ + EGE + R ++G TNP ++A GTIR D A+ N +HGSDS ESA +EI +FP+ I Sbjct: 3 LERTFSIVKPDAVERNLIGEIYHRIEKAGLRIVAAKMVHLTEEQASGFYAEHEGKPFFPALKEFMTSGPIMVQVLEGEDAIARYRELMGKTNPEEAACGTIRADYALSMRHNSVHGSDSPESAAREIEFFFPESEI 138
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_SALAR (Nucleoside diphosphate kinase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=ndk PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.464e-27 Identity = 58/136 (42.65%), Postives = 86/136 (63.24%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 460 +E+TF +IKP+ V + ++G I RFE GF + G +++ + A Y + KPFF L+E++TSGP+V + E E V+ R ++GATNPA + GT+R D A N HGSDS+ESAQ+EIA +F +G + Sbjct: 3 IERTFSIIKPNAVAKNVIGSIFARFEAAGFRIVGTRMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSFTENGTHGSDSLESAQREIAFFFGEGEV 138
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_LEGPA (Nucleoside diphosphate kinase OS=Legionella pneumophila (strain Paris) GN=ndk PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.464e-27 Identity = 57/130 (43.85%), Postives = 84/130 (64.62%), Query Frame = 2 Query: 56 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 445 E T +IKPD V + ++GEI RFEK G + K++ + R AE Y+ ++PFF L++++ SGPV+ + +G+ V R I+GATNP ++APGTIR D A N +HGSDS+E+A +EIA +F Sbjct: 4 ELTLSIIKPDAVAKSVIGEIYTRFEKAGLDIVAAKMIQLSREQAESFYDIHRARPFFKDLVDFMISGPVMIQVLKGDNAVAKNREIMGATNPKEAAPGTIRADFADSIDANAVHGSDSLENAAREIAFFF 133
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_DESAH (Nucleoside diphosphate kinase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=ndk PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.464e-27 Identity = 57/133 (42.86%), Postives = 88/133 (66.17%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 451 ME+T +IKPDGV++ L+GE++ RF+ +G + LK+M + + A+ Y +PFF SL E++TSGP+V M+ EG+ V+ R ++GATN ++ GTIR D A +N++HGSD+ E+A EI +F D Sbjct: 1 MERTLSIIKPDGVKKNLIGEVVKRFQDQGIHIAALKMMQLTQKQAQGFYAVHRERPFFNSLTEFMTSGPIVVMVLEGDDVIAKNRKLMGATNFKEAEEGTIRRDFATDIEKNVVHGSDAPETAAFEIGYFFND 133
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_BDEBA (Nucleoside diphosphate kinase OS=Bdellovibrio bacteriovorus GN=ndk PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.464e-27 Identity = 55/131 (41.98%), Postives = 85/131 (64.89%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 445 +EQTF +IKP+ +++ +G+I+ FE G + K+ + AE+ Y + ++PFFG L+ ++TSGPV+ M +GEG V R I+GAT+P ++ PGT+R G N +HGSDS ESA +E+AL+F Sbjct: 3 IEQTFSIIKPNAMKKNAIGDIVSMFEANGLKIAAAKITVLTTAKAEEFYAEHKARPFFGELVSFMTSGPVMLMCLQGEGAVLKNREIMGATDPKKANPGTVRAKFGDNVGENAVHGSDSPESAARELALFF 133
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_SHEPA (Nucleoside diphosphate kinase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ndk PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.236e-26 Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 445 +E+TF +IKPD V + +G I RFE G + K++ + + AE Y + S +PFFG+L+ ++TSGP++ EGE V R I+GATNPA++A GTIR D A N HGSDSV SA++E+A +F Sbjct: 3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIIASKMIHLSKEQAEGFYAEHSERPFFGALVAFMTSGPIMVQTLEGENAVLAHREILGATNPAEAAEGTIRADFAESIDENAAHGSDSVASAEREVAYFF 133
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_SHEHH (Nucleoside diphosphate kinase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ndk PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.236e-26 Identity = 60/131 (45.80%), Postives = 84/131 (64.12%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 445 +E+TF +IKPD V + +G I RFE G + K++ + + AE Y + S +PFFG+L+ ++TSGP++ EGE V R I+GATNPA++A GTIR D A N HGSDSV SA++EIA +F Sbjct: 3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIIASKMVHLSQEQAEGFYAEHSERPFFGALVAFMTSGPIMVQTLEGENAVLAHREILGATNPAEAAEGTIRADFAESIDENAAHGSDSVASAEREIAYFF 133
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_SERP5 (Nucleoside diphosphate kinase OS=Serratia proteamaculans (strain 568) GN=ndk PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.236e-26 Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 460 +E+TF +IKP+ V +G I RFE+ GF + K++ + R AE Y + +PFF L+E++TSGP+V + E E V+ R I+GATNP + GT+R D A N +HGSD+VESAQ+EIA +F + I Sbjct: 3 VERTFSIIKPNAVANNDIGAIYARFERAGFKIIASKMLRLTREQAEGFYAEHKGRPFFDGLVEFMTSGPIVVQVLEAENAVQRNRDIMGATNPDNALAGTLRADYADSFTANAVHGSDAVESAQREIAYFFNESEI 138
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_PSYWF (Nucleoside diphosphate kinase OS=Psychrobacter sp. (strain PRwf-1) GN=ndk PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.236e-26 Identity = 59/136 (43.38%), Postives = 84/136 (61.76%), Query Frame = 2 Query: 53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 460 +E+T +IKPD V +G I RFE+ G + G K++ +D A Y + +PF+ L+ ++TSGPVV + EGE + R I+GATNPA++A GTIR D A N +HGSDS ESA++EIA +F D + Sbjct: 3 IERTLSIIKPDAVGGNHIGAIYSRFEEAGLKIVGAKMLHLDDEKAGGFYAEHKERPFYNDLVSFMTSGPVVVSVLEGENAIAKHREIMGATNPAEAAEGTIRKDFASSIDENAVHGSDSAESAKREIAYFFSDNEV 138 The following BLAST results are available for this feature:
BLAST of CF834682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834682 ID=CF834682; Name=CF834682; organism=Citrus sinensis; type=EST; length=648bpback to top |