CF834682

Overview
NameCF834682
Unique NameCF834682
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length648
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_XANOM (Nucleoside diphosphate kinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25
Identity = 59/131 (45.04%), Postives = 79/131 (60.31%), Query Frame = 2 
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 445
            +E+T  +IKPD V + ++GEI  RFEK G  +   K   + R  AE  Y     +PFF +L+E++ SGPV+    EGE  V   R ++GATNP  +APGTIR D A     N  HGSDSVE+A  E+A +F
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
[Close]
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_XANCP (Nucleoside diphosphate kinase OS=Xanthomonas campestris pv. campestris GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25
Identity = 59/131 (45.04%), Postives = 79/131 (60.31%), Query Frame = 2 
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 445
            +E+T  +IKPD V + ++GEI  RFEK G  +   K   + R  AE  Y     +PFF +L+E++ SGPV+    EGE  V   R ++GATNP  +APGTIR D A     N  HGSDSVE+A  E+A +F
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
[Close]
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_XANCB (Nucleoside diphosphate kinase OS=Xanthomonas campestris pv. campestris (strain B100) GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25
Identity = 59/131 (45.04%), Postives = 79/131 (60.31%), Query Frame = 2 
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 445
            +E+T  +IKPD V + ++GEI  RFEK G  +   K   + R  AE  Y     +PFF +L+E++ SGPV+    EGE  V   R ++GATNP  +APGTIR D A     N  HGSDSVE+A  E+A +F
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
[Close]
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_XANC8 (Nucleoside diphosphate kinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25
Identity = 59/131 (45.04%), Postives = 79/131 (60.31%), Query Frame = 2 
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 445
            +E+T  +IKPD V + ++GEI  RFEK G  +   K   + R  AE  Y     +PFF +L+E++ SGPV+    EGE  V   R ++GATNP  +APGTIR D A     N  HGSDSVE+A  E+A +F
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
[Close]
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_XANC5 (Nucleoside diphosphate kinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25
Identity = 59/131 (45.04%), Postives = 79/131 (60.31%), Query Frame = 2 
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 445
            +E+T  +IKPD V + ++GEI  RFEK G  +   K   + R  AE  Y     +PFF +L+E++ SGPV+    EGE  V   R ++GATNP  +APGTIR D A     N  HGSDSVE+A  E+A +F
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
[Close]
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_XANAC (Nucleoside diphosphate kinase OS=Xanthomonas axonopodis pv. citri GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25
Identity = 59/131 (45.04%), Postives = 79/131 (60.31%), Query Frame = 2 
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 445
            +E+T  +IKPD V + ++GEI  RFEK G  +   K   + R  AE  Y     +PFF +L+E++ SGPV+    EGE  V   R ++GATNP  +APGTIR D A     N  HGSDSVE+A  E+A +F
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133
[Close]
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_STRMK (Nucleoside diphosphate kinase OS=Stenotrophomonas maltophilia (strain K279a) GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25
Identity = 60/131 (45.80%), Postives = 80/131 (61.07%), Query Frame = 2 
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 445
            +E+T  +IKPD V + ++GEI  RFEK G  +   K   + R  AE  Y     +PFF +L+E++ SGPV+    EGE  V   R ++GATNP ++APGTIR D A     N  HGSDSVE+A  EIA +F
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYARFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVLAHRDLLGATNPKEAAPGTIRADFAESIDANAAHGSDSVENAAIEIAYFF 133
[Close]
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_STRM5 (Nucleoside diphosphate kinase OS=Stenotrophomonas maltophilia (strain R551-3) GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25
Identity = 60/131 (45.80%), Postives = 80/131 (61.07%), Query Frame = 2 
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 445
            +E+T  +IKPD V + ++GEI  RFEK G  +   K   + R  AE  Y     +PFF +L+E++ SGPV+    EGE  V   R ++GATNP ++APGTIR D A     N  HGSDSVE+A  EIA +F
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYARFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVLAHRDLLGATNPKEAAPGTIRADFAESIDANAAHGSDSVENAAIEIAYFF 133
[Close]
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_VIBPA (Nucleoside diphosphate kinase OS=Vibrio parahaemolyticus GN=ndk PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.367e-25
Identity = 56/136 (41.18%), Postives = 83/136 (61.03%), Query Frame = 2 
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 460
            +E+TF ++KPD V+R L+GEI  R EK G  +   K++ +    A   Y +   K FF  L E++TSGP++  + EGE  +   R ++G TNP ++A GT+R D A+    N +HGSDS ESA +EI  +FP+  I
Sbjct:    3 LERTFSIVKPDAVERNLIGEIYNRIEKAGLRIIAAKMVHLTEEQASGFYAEHEGKEFFQPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAAAGTLRADYALSMRHNSVHGSDSPESAAREIEFFFPESEI 138
[Close]
BLAST of CF834682 vs. ExPASy Swiss-Prot
Match: NDK_VIBCM (Nucleoside diphosphate kinase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=ndk PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.367e-25
Identity = 57/136 (41.91%), Postives = 83/136 (61.03%), Query Frame = 2 
Query:   53 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 460
            +E+TF +IKPD V+R L+GEI  R EK G  +   K++ +    A   Y +   KPFF  L E++TSGP++  + EGE  +   R ++G TNP ++A GT+R D A+    N +HGSDS  SA +EI  +FP+  I
Sbjct:    3 LERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTLRADYALSMRYNSVHGSDSPASAAREIEFFFPESEI 138
The following BLAST results are available for this feature:
BLAST of CF834682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_XANOM1.046e-2545.04Nucleoside diphosphate kinase OS=Xanthomonas oryza... [more]
NDK_XANCP1.046e-2545.04Nucleoside diphosphate kinase OS=Xanthomonas campe... [more]
NDK_XANCB1.046e-2545.04Nucleoside diphosphate kinase OS=Xanthomonas campe... [more]
NDK_XANC81.046e-2545.04Nucleoside diphosphate kinase OS=Xanthomonas campe... [more]
NDK_XANC51.046e-2545.04Nucleoside diphosphate kinase OS=Xanthomonas campe... [more]
NDK_XANAC1.046e-2545.04Nucleoside diphosphate kinase OS=Xanthomonas axono... [more]
NDK_STRMK1.046e-2545.80Nucleoside diphosphate kinase OS=Stenotrophomonas ... [more]
NDK_STRM51.046e-2545.80Nucleoside diphosphate kinase OS=Stenotrophomonas ... [more]
NDK_VIBPA1.367e-2541.18Nucleoside diphosphate kinase OS=Vibrio parahaemol... [more]
NDK_VIBCM1.367e-2541.91Nucleoside diphosphate kinase OS=Vibrio cholerae s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05P02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05P02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834682 ID=CF834682; Name=CF834682; organism=Citrus sinensis; type=EST; length=648bp
TGCTATTTCACTCTTTTCTCAAAACAAGTTGGTTTCTCTGAATCTCAAAG
AAATGGAACAAACTTTCATCATGATCAAGCCCGATGGGGTCCAAAGAGGC
CTTGTTGGTGAAATCATCATCAGATTTGAGAAGAAGGGTTTCTCCTTGAA
GGGTTTGAAGCTTATGACTGTGGACCGCCCTTTTGCTGAGAAGCACTATG
AGGATTTGTCATCGAAGCCTTTCTTTGGTTCTCTGATTGAGTACATTACC
TCTGGTCCTGTTGTTGCTATGATTTGGGAGGGTGAAGGTGTTGTTAAGAC
TGGCCGCACTATTATTGGAGCCACCAACCCTGCGCAGTCTGCTCCTGGAA
CCATCCGTGGTGATTTGGCTATCGTGACGGGCAGGAATATCATCCATGGA
AGTGACTCAGTTGAGAGTGCCCAGAAAGAAATCGCCTTGTGGTTCCCTGA
TGGCCCTATTAACTGGCAGAGCAGCCTTCACCCTTGGATCTATGAGTAAA
CTAATGTTTGGTTGAGGAGCCTAATTGTTCCTGCAGTTAGACTTATCCCT
ATCCCTATCCCTATTTCCTTATTTATGGTTACTCCTTGTTGGTGAACTGT
TATGAAGTATTGAGTTAAATTGAGACCAATCCTGGTTATGTTGGCTGC
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