CF834687

Overview
NameCF834687
Unique NameCF834687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF834687_ssr517 microsatellite CF834687_ssr517:517..531. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: MENE_BACCZ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ZK / E33L) GN=menE PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22
Identity = 63/178 (35.39%), Postives = 97/178 (54.49%), Query Frame = -3 
Query:  204 KSGSCGTVVRNAELKVIDHEVGASLPHNHRGEICIRGPQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 737
            K GS G  +   +L++   + G  +P    GEI ++GP +  GY N  +AT   I   GWLHT               DR  ++I   G  + P++IE +LLSHP +A+A VV   D+  G+VP AFVV+S   E+ EE I  +  +++  YK   K +F+  +P++ S K+LR++LR
Sbjct:  304 KVGSAGKPLFQCQLRI--EKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSG--EITEEEILHFCEEKLAKYKVPKKAWFLEELPRNASKKLLRRELR 476
[Close]
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: MENE_BACC1 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 10987) GN=menE PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.778e-22
Identity = 64/178 (35.96%), Postives = 97/178 (54.49%), Query Frame = -3 
Query:  204 KSGSCGTVVRNAELKVIDHEVGASLPHNHRGEICIRGPQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 737
            K GS G  +   +L++   + G  +P    GEI ++GP +  GY N  +AT   I   GWLHT               DR  ++I   G  + P++IE +LLSHP++A+A VV   D+  G+VPVAFVV+S   E+ EE I  +   ++  YK   K  F+  +P++ S K+LR++LR
Sbjct:  303 KVGSAGKPLFQCQLRI--EKDGVVVPAFTEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPVAFVVKSG--EVTEEEIIHFCEAKLAKYKVPKKACFLEELPRNASKKLLRRELR 475
[Close]
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: MENE_BACCQ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain Q1) GN=menE PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.852e-22
Identity = 63/178 (35.39%), Postives = 97/178 (54.49%), Query Frame = -3 
Query:  204 KSGSCGTVVRNAELKVIDHEVGASLPHNHRGEICIRGPQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 737
            K GS G  +   +L++   + G  +P    GEI ++GP +  GY N  +AT   I   GWLHT               DR  ++I   G  + P++IE +LLSHP++A+A VV   D+  G+VP AFVV+S   E+ EE I  +  +++  YK   K  F+  +P++ S K+LR++LR
Sbjct:  303 KVGSAGKPLFQCQLRI--EKDGVVVPAFTEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPAAFVVKSG--EVTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 475
[Close]
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: MENE_GEOSW (2-succinylbenzoate--CoA ligase OS=Geobacillus sp. (strain WCH70) GN=menE PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.156e-21
Identity = 64/178 (35.96%), Postives = 98/178 (55.06%), Query Frame = -3 
Query:  204 KSGSCGTVVRNAELKVIDHEVGASLPHNHRGEICIRGPQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 737
            K GS G  +  ++L+ I+ +   + P+   GEI ++GP + KGYL+ P+ATA  I   GW +T               DR  ++I   G  V P+EIEA+LLSH ++ +A V    DE  G+VP AFV R  G+ +  E +K++    +  YK   +IYFV  +P++ S K+LR  L+
Sbjct:  307 KLGSAGKPLFPSQLR-IEKDGQVARPYEP-GEIVVKGPNVTKGYLHRPDATAKAIR-GGWFYTGDIGYIDEDGFLYVLDRRSDLIISGGENVYPAEIEAVLLSHEAVEEAGVTGIDDETWGQVPCAFVKRKRGYSVTVEQLKQFCQAHLAKYKIPKQIYFVDELPRNASQKLLRHQLK 481
[Close]
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: MENE_BACC0 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH820) GN=menE PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.156e-21
Identity = 63/178 (35.39%), Postives = 96/178 (53.93%), Query Frame = -3 
Query:  204 KSGSCGTVVRNAELKVIDHEVGASLPHNHRGEICIRGPQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 737
            K GS G  +   +L++   + G  +P    GEI ++GP +  GY N  +AT   I   GWLHT               DR  ++I   G  + P++IE +LLSHP +A+A VV   D+  G+VP AFVV+S   E+ EE I  +  +++  YK   K  F+  +P++ S K+LR++LR
Sbjct:  304 KVGSAGKPLFQCQLRI--EKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSG--EITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 476
[Close]
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: MENE_BACAN (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis GN=menE PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.156e-21
Identity = 63/178 (35.39%), Postives = 96/178 (53.93%), Query Frame = -3 
Query:  204 KSGSCGTVVRNAELKVIDHEVGASLPHNHRGEICIRGPQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 737
            K GS G  +   +L++   + G  +P    GEI ++GP +  GY N  +AT   I   GWLHT               DR  ++I   G  + P++IE +LLSHP +A+A VV   D+  G+VP AFVV+S   E+ EE I  +  +++  YK   K  F+  +P++ S K+LR++LR
Sbjct:  303 KVGSAGKPLFQCQLRI--EKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSG--EITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 475
[Close]
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: MENE_BACAC (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=menE PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.156e-21
Identity = 63/178 (35.39%), Postives = 96/178 (53.93%), Query Frame = -3 
Query:  204 KSGSCGTVVRNAELKVIDHEVGASLPHNHRGEICIRGPQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 737
            K GS G  +   +L++   + G  +P    GEI ++GP +  GY N  +AT   I   GWLHT               DR  ++I   G  + P++IE +LLSHP +A+A VV   D+  G+VP AFVV+S   E+ EE I  +  +++  YK   K  F+  +P++ S K+LR++LR
Sbjct:  304 KVGSAGKPLFQCQLRI--EKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSG--EITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 476
[Close]
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: MENE_BACAA (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain A0248) GN=menE PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.156e-21
Identity = 63/178 (35.39%), Postives = 96/178 (53.93%), Query Frame = -3 
Query:  204 KSGSCGTVVRNAELKVIDHEVGASLPHNHRGEICIRGPQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 737
            K GS G  +   +L++   + G  +P    GEI ++GP +  GY N  +AT   I   GWLHT               DR  ++I   G  + P++IE +LLSHP +A+A VV   D+  G+VP AFVV+S   E+ EE I  +  +++  YK   K  F+  +P++ S K+LR++LR
Sbjct:  304 KVGSAGKPLFQCQLRI--EKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSG--EITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 476
[Close]
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: MENE_BACHK (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis subsp. konkukian GN=menE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.510e-21
Identity = 63/178 (35.39%), Postives = 96/178 (53.93%), Query Frame = -3 
Query:  204 KSGSCGTVVRNAELKVIDHEVGASLPHNHRGEICIRGPQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 737
            K GS G  +   +L++   + G  +P    GEI ++GP +  GY N  +AT   I   GWLHT               DR  ++I   G  + P++IE +LLSHP +A+A VV   D+  G+VP AFVV+S   E+ EE I  +  +++  YK   K  F+  +P++ S K+LR++LR
Sbjct:  304 KVGSAGKPLFQCQLRI--EKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSG--EVTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 476
[Close]
BLAST of CF834687 vs. ExPASy Swiss-Prot
Match: MENE_BACAH (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis (strain Al Hakam) GN=menE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.510e-21
Identity = 63/178 (35.39%), Postives = 96/178 (53.93%), Query Frame = -3 
Query:  204 KSGSCGTVVRNAELKVIDHEVGASLPHNHRGEICIRGPQIMKGYLNDPEATAAIIDVEGWLHTXXXXXXXXXXXXXXXDRVKEIIKFKGFQVPPSEIEALLLSHPSIADAAVVPQKDEVAGEVPVAFVVRSNGFELAEEAIKEYIAKQVVFYKRLPKIYFVHAIPKSPSGKILRKDLR 737
            K GS G  +   +L++   + G  +P    GEI ++GP +  GY N  +AT   I   GWLHT               DR  ++I   G  + P++IE +LLSHP +A+A VV   D+  G+VP AFVV+S   E+ EE I  +  +++  YK   K  F+  +P++ S K+LR++LR
Sbjct:  304 KVGSAGKPLFQCQLRI--EKDGVVVPPFVEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSG--EITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 476
The following BLAST results are available for this feature:
BLAST of CF834687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
MENE_BACCZ3.974e-2235.392-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACC16.778e-2235.962-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACCQ8.852e-2235.392-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_GEOSW1.156e-2135.962-succinylbenzoate--CoA ligase OS=Geobacillus sp. ... [more]
MENE_BACC01.156e-2135.392-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACAN1.156e-2135.392-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAC1.156e-2135.392-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAA1.156e-2135.392-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACHK1.510e-2135.392-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]
MENE_BACAH1.510e-2135.392-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05P12_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05P12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834687 ID=CF834687; Name=CF834687; organism=Citrus sinensis; type=EST; length=739bp
ATAAGAATTATTAATTTTACCAAAATTTATTACAATAACCCTTTGGAAAA
CTACTCATCAGAATTACATATTACAAGCAAACATGATAATTTTTTTTGTC
ACACCATTTGAAGTTCTTGAATGCCAACAACTCAAAGGCGAACAAAAACT
AACGCAATAAATAAGAAGAATTAATTCAAGGGCATTGAAGAGGCCAGCTT
GGCTCTGAGATCTTTCCTCAAAATCTTACCGGAAGGAGATTTTGGAATCG
CATGAACAAAATAAATCTTGGGCAGTCTCTTGTAAAACACTACCTGTTTT
GCTATGTATTCTTTAATGGCTTCCTCGGCAAGTTCAAACCCATTTGATCG
AACTACAAATGCAACTGGAACTTCTCCTGCAACTTCATCTTTTTGCGGAA
CCACAGCTGCATCTGCAATTGATGGGTGGCTTAAAAGGAGGGCTTCAATC
TCCGACGGCGGCACCTGGAATCCTTTGAATTTGATGATTTCCTTGACCCT
ATCGACTATGAAAACCTCATCATCATCATCAACAAAGCCTATGTCACCAG
TATGAAGCCAACCCTCAACGTCTATAATTGCCGCAGTTGCCTCAGGATCA
TTCAAGTAACCTTTCATAATTTGAGGGCCGCGGATGCAAATTTCGCCACG
ATGATTGTGGGGAAGGGAGGCACCAACTTCATGGTCAATAACTTTGAGCT
CAGCATTTCTAACAACCGTGCCACATGATCCTGACTTTG
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