CF834696

Overview
NameCF834696
Unique NameCF834696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10176 contig Csv1_Contig10176:84..872. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834696 vs. ExPASy Swiss-Prot
Match: API8_SOLTU (Aspartic protease inhibitor 8 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.212e-11
Identity = 62/203 (30.54%), Postives = 98/203 (48.28%), Query Frame = -3
Query:  222 TQPLLGISSNS---EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLP*ANYKIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDS----YDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSC--PRRCNKIGVSIKDGVRRLLLVGDHEPALNVLF 788
            +Q L+ + S S   +PVLD  G ++     Y++I +  GA G   +LG    ++  CP  V + +S     G  +R +P +         ++    P   +VK C    +WKV +    +   L+ TGG+ G   +    ++FKI K  NF Y  +Y  +  P +C  C     C K+GV I++G RRL LV  +E  L+VLF
Sbjct:   24 SQNLIDLPSESPLPKPVLDTNGKELNPDSSYRIISIGRGALGGDVYLGKSPNSDAPCPDGVFRYNSDVGPSGTPVRFIPLSGGIFEDQLLNIQFNIP---TVKLCVSYTIWKVGNLNAYFRTMLLETGGTIGQADS----SYFKIVKLSNFGYNLLYCPITPPFLCPFCRDDNFCAKVGVVIQNGKRRLALV--NENPLDVLF 217          
BLAST of CF834696 vs. ExPASy Swiss-Prot
Match: API11_SOLTU (Aspartic protease inhibitor 11 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11
Identity = 59/189 (31.22%), Postives = 95/189 (50.26%), Query Frame = -3
Query:  222 EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLP*ANYKIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDS----YDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSC--PRRCNKIGVSIKDGVRRLLLVGDHEPALNVLF 755
            +PVLD  G ++     Y++I +  GA G   +LG    ++  CP  V + +S     G  +R +P +    +     +N++F +  +VK C    +WKV +    +   L+ TGG+ G   +    ++FKI K  NF Y  +Y  +  P +C  C     C K+GV I++G RRL LV  +E  L+VLF
Sbjct:    6 KPVLDTNGKELNPNSSYRIISIGRGALGGDVYLGKSPNSDAPCPDGVFRYNSDVGPSGTPVRFIPLSGG--IFEDQLLNIQFNI-ATVKLCVSYTIWKVGNLNAYFRTMLLETGGTIGQADS----SYFKIVKLSNFGYNLLYCPITPPFLCPFCRDDNFCAKVGVVIQNGKRRLALV--NENPLDVLF 185          
BLAST of CF834696 vs. ExPASy Swiss-Prot
Match: SPI5_SOLTU (Serine protease inhibitor 5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11
Identity = 56/192 (29.17%), Postives = 97/192 (50.52%), Query Frame = -3
Query:  246 TQPLLGISSNSEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLP*ANY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYD----DPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSIKDGVRRLLLVGDH 788
            +Q  + + S++ PVLD+ G ++   L Y++I +  GA G   +LG    ++  C   V + +S     G  +R +  +++    +     +N++F +  +VK C    +WKV  YD      L+ TGG+ G   +    +WFKI K+        YN+++CP    S  + C K+GV  ++G RRL LV D+
Sbjct:   23 SQNPINLPSDATPVLDVTGKELDPRLSYRIISIGRGALGGDVYLGKSPNSDAPCANGVFRFNSDVGPSGTPVRFIGSSSHFGPHIFEGELLNIQFDIS-TVKLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLG----YNLLYCP--FSSDDQFCLKVGVVHQNGKRRLALVKDN 203          
The following BLAST results are available for this feature:
BLAST of CF834696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
API8_SOLTU1.212e-1130.54Aspartic protease inhibitor 8 OS=Solanum tuberosum... [more]
API11_SOLTU3.526e-1131.22Aspartic protease inhibitor 11 OS=Solanum tuberosu... [more]
SPI5_SOLTU4.606e-1129.17Serine protease inhibitor 5 OS=Solanum tuberosum P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05P17_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05P17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834696 ID=CF834696; Name=CF834696; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTCTTTTTTTAACACAGCAAAAGGATCACAGGCGTGG
ATTATTTTTATTCTGGAATAGAGATAAAAGGTTACTAGCCTGGTCTATTA
TTTAAAATGATACAGCTAAGTTCATTCATTACGCGGTCATTGATATTGCT
TCAGCAGCTTCAAAAAACCTTGATATTGCGTTAGCAGCTTGAAGTAGCCT
TGAGCTTTCCTCTGATGGAAAAAACAGAACATTCAAAGCCGGTTCATGAT
CACCAACTAGAAGCAAACGTCGAACGCCATCCTTAATTGAAACGCCAATT
TTGTTGCAGCGTCTAGGACAAGATAGACAGACACTCGGACAATGGACAAT
ATTGTATACACCACCATATGAAAAATTTCCAGCTTTCTCAATCTTAAACC
AATTTAGCAACGTTTCAGCTCCTGGGTGGCCCTCACTTCCGCCGGTTACA
ATTAATGGATCGTCATAGCTATCAACTTTCCACAATGGTTCTTCATTACA
GGGCTTAACAGAAACTTTTACGGGGAATCTCAGGTTGACATCAGTGGATA
CCTTGACAATTTTGTAATTGGCCTACGGAAGTAATCTTAAATTATCTCCC
CTTTCGCTAGGAGAACTTAATTGGATAACGTCCAAGGGACACTGTCCATT
TGTGCCTAGGTGTGTGCTGAATCCACCGGCGCCATCTAGGACTGGGATAA
GTTTATACTCGAGGGTGGATTTGACCTTGTTGCCAATGATATCTAACACA
GGTTCAGAGTTTGATGAGATGCCCAATAGAGGCTGCGTGG
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