CF834718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_SHEDO (50S ribosomal protein L2 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18 Identity = 55/148 (37.16%), Postives = 79/148 (53.38%), Query Frame = -3 Query: 287 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 730 R + L +GM +G + G + + GN +P+R+IP G+VV VE G +AR++G Y +I+ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 101 RRYILAAKGMKSGDPIQSGVGSEIKTGNSMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVIAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAG-----AKRWRGVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_RICRS (50S ribosomal protein L2 OS=Rickettsia rickettsii (strain Sheila Smith) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18 Identity = 55/151 (36.42%), Postives = 81/151 (53.64%), Query Frame = -3 Query: 287 SFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 727 S+ L + + G V + A + +GN LP++ IP G + NVE VG G +AR++G ++ D+ ++KL SG +++P C+A IG ++ + L KAG RN W P VRGVAMNPV+HPHGGG + G Sbjct: 102 SYILAPQKLSVGDRVISSQDADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGK--DSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAG---------RNRWLGWRPHVRGVAMNPVDHPHGGGEGKTSG 241
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_RICRO (50S ribosomal protein L2 OS=Rickettsia rickettsii (strain Iowa) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18 Identity = 55/151 (36.42%), Postives = 81/151 (53.64%), Query Frame = -3 Query: 287 SFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 727 S+ L + + G V + A + +GN LP++ IP G + NVE VG G +AR++G ++ D+ ++KL SG +++P C+A IG ++ + L KAG RN W P VRGVAMNPV+HPHGGG + G Sbjct: 102 SYILAPQKLSVGDRVISSQDADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGK--DSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAG---------RNRWLGWRPHVRGVAMNPVDHPHGGGEGKTSG 241
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_RICPU (50S ribosomal protein L2 OS=Rickettsia peacockii (strain Rustic) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18 Identity = 55/151 (36.42%), Postives = 81/151 (53.64%), Query Frame = -3 Query: 287 SFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 727 S+ L + + G V + A + +GN LP++ IP G + NVE VG G +AR++G ++ D+ ++KL SG +++P C+A IG ++ + L KAG RN W P VRGVAMNPV+HPHGGG + G Sbjct: 102 SYILAPQKLSVGDRVISSQDADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGK--DSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAG---------RNRWLGWRPHVRGVAMNPVDHPHGGGEGKTSG 241
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_RICCN (50S ribosomal protein L2 OS=Rickettsia conorii GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18 Identity = 55/151 (36.42%), Postives = 81/151 (53.64%), Query Frame = -3 Query: 287 SFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 727 S+ L + + G V + A + +GN LP++ IP G + NVE VG G +AR++G ++ D+ ++KL SG +++P C+A IG ++ + L KAG RN W P VRGVAMNPV+HPHGGG + G Sbjct: 102 SYILAPQKLSVGDRVISSQDADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGK--DSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAG---------RNRWLGWRPHVRGVAMNPVDHPHGGGEGKTSG 241
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_RICAE (50S ribosomal protein L2 OS=Rickettsia africae (strain ESF-5) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18 Identity = 55/151 (36.42%), Postives = 81/151 (53.64%), Query Frame = -3 Query: 287 SFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 727 S+ L + + G V + A + +GN LP++ IP G + NVE VG G +AR++G ++ D+ ++KL SG +++P C+A IG ++ + L KAG RN W P VRGVAMNPV+HPHGGG + G Sbjct: 102 SYILAPQKLSVGDRVISSQDADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGK--DSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAG---------RNRWLGWRPHVRGVAMNPVDHPHGGGEGKTSG 241
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_RHOBA (50S ribosomal protein L2 OS=Rhodopirellula baltica GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18 Identity = 53/134 (39.55%), Postives = 76/134 (56.72%), Query Frame = -3 Query: 305 GMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 706 G+ G + G A +VGN LP+++IP G VC +E G V+ R++G A + + + D ++ LPSG + +PS CRA IGQV L KAG + ++ +R P VRG AMNP++HPHGGG Sbjct: 110 GVAAGDKLQNGPDAPPVVGNCLPLKNIPLGTSVCCIEMRAGRGAVMCRSAGTQATLQAR--EADWAQLLLPSGEVRRVPSACRATIGQVGNSDHMNIVLGKAGRS--RWLGRR---PHVRGTAMNPIDHPHGGG 236
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_POLSJ (50S ribosomal protein L2 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18 Identity = 54/144 (37.50%), Postives = 82/144 (56.94%), Query Frame = -3 Query: 305 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKR--NCWPKVRGVAMNPVEHPHGGG 730 R++ + RG+ G + G +A + VGN LP+R+IP G+ + +E +G +AR++G A +++ + +V++ SG + I CRA IG+VA + + L KAG VKR P VRGV MNPV+HPHGGG Sbjct: 101 RTYIIAPRGLEVGATLISGSEAPIRVGNTLPIRNIPVGSTIHCIEMQIGKGAQIARSAGTSATLLAR--EGTYAQVRMRSGEVRKIHIECRATIGEVANEEHSLRRLGKAG-------VKRWMGIRPTVRGVVMNPVDHPHGGG 235
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_PARL1 (50S ribosomal protein L2 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18 Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = -3 Query: 287 SFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 727 ++ L + + G V G + + GN +P+ +IP G +V NVE G G +AR++G Y ++ D ++L SG ++++P+ C A IG V+ + + KAG RN W P VRGV MNPV+HPHGGG + G Sbjct: 102 AYILAPQRLQPGDVVISGSRVDVKPGNAMPLANIPVGTIVHNVEMKPGKGGQIARSAGTYVQLVGR--DQGYALLRLSSGEQRMVPATCMASIGAVSNPDHSNITIAKAG---------RNRWLGKRPHVRGVVMNPVDHPHGGGEGRTSG 241
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_GEOSM (50S ribosomal protein L2 OS=Geobacter sp. (strain M21) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18 Identity = 54/140 (38.57%), Postives = 77/140 (55.00%), Query Frame = -3 Query: 287 GQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 694 G V ++A + GN LP+R IP G ++ N+E +G LAR++G +A +++ + +VKLPSG ++I C+A IGQV + KAG R+ W P VRGVAMNPV+HPHGGG + G Sbjct: 113 GDTVISSEQADIKPGNALPIRCIPLGTIIHNIELKIGKGAQLARSAGTFAQLMA--KEGKYGQVKLPSGEVRMILMDCKATIGQVGNVDHENVSIGKAG---------RSRWLGVRPHVRGVAMNPVDHPHGGGEGRTSG 241 The following BLAST results are available for this feature:
BLAST of CF834718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834718 ID=CF834718; Name=CF834718; organism=Citrus sinensis; type=EST; length=732bpback to top |