CF834718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_ALKMQ (50S ribosomal protein L2 OS=Alkaliphilus metalliredigens (strain QYMF) GN=rplB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17 Identity = 54/147 (36.73%), Postives = 80/147 (54.42%), Query Frame = -3 Query: 272 RGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHASTV 709 +G+ G+ ++ G ++ + VGN LP+ +IP G ++ N+E G G +AR++G+ A +++ + V+LPSG + I CRA IGQV + KAG + K P VRG AMNP +HPHGGG IG S V Sbjct: 108 KGLKVGEMIFSGPESDIKVGNALPLINIPVGTIIHNIEMKPGKGGQIARSAGNSAQLMA--KEGRYALVRLPSGEVRQILIECRATIGQVGNLDHENVTIGKAGR-----KRKMGIRPTVRGSAMNPNDHPHGGGEGRSPIGRPSPV 247
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_ACIBY (50S ribosomal protein L2 OS=Acinetobacter baumannii (strain AYE) GN=rplB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17 Identity = 56/162 (34.57%), Postives = 87/162 (53.70%), Query Frame = -3 Query: 245 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 730 R + + +G+ G V G A + GN LP+R++P G+ + NVE +G LAR++G ++ D ++L SG + + CRA+IG+V+ + L KAG A R P VRG+AMNP++HPHGGG ++ G ++ +P GQK Sbjct: 101 RRYIIAPKGLRAGDKVQSGNDAPIRPGNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGASVQLLGR--DGSYAIIRLRSGEMRKVHVECRAVIGEVSNQENNLRSLGKAGAARW-----RGVRPTVRGMAMNPIDHPHGGGEGRNKG----IQPVSPWGQK 251
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_ACIBT (50S ribosomal protein L2 OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=rplB PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17 Identity = 56/162 (34.57%), Postives = 87/162 (53.70%), Query Frame = -3 Query: 245 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 730 R + + +G+ G V G A + GN LP+R++P G+ + NVE +G LAR++G ++ D ++L SG + + CRA+IG+V+ + L KAG A R P VRG+AMNP++HPHGGG ++ G ++ +P GQK Sbjct: 101 RRYIIAPKGLRAGDKVQSGNDAPIRPGNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGASVQLLGR--DGSYAIIRLRSGEMRKVHVECRAVIGEVSNQENNLRSLGKAGAARW-----RGVRPTVRGMAMNPIDHPHGGGEGRNKG----IQPVSPWGQK 251
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_ACIBS (50S ribosomal protein L2 OS=Acinetobacter baumannii (strain SDF) GN=rplB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17 Identity = 56/162 (34.57%), Postives = 87/162 (53.70%), Query Frame = -3 Query: 245 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 730 R + + +G+ G V G A + GN LP+R++P G+ + NVE +G LAR++G ++ D ++L SG + + CRA+IG+V+ + L KAG A R P VRG+AMNP++HPHGGG ++ G ++ +P GQK Sbjct: 101 RRYIIAPKGLRAGDKVQSGNDAPIRPGNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGASVQLLGR--DGSYAIIRLRSGEMRKVHVECRAVIGEVSNQENNLRSLGKAGAARW-----RGVRPTVRGMAMNPIDHPHGGGEGRNKG----IQPVSPWGQK 251
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_ACIB5 (50S ribosomal protein L2 OS=Acinetobacter baumannii (strain AB0057) GN=rplB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17 Identity = 56/162 (34.57%), Postives = 87/162 (53.70%), Query Frame = -3 Query: 245 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 730 R + + +G+ G V G A + GN LP+R++P G+ + NVE +G LAR++G ++ D ++L SG + + CRA+IG+V+ + L KAG A R P VRG+AMNP++HPHGGG ++ G ++ +P GQK Sbjct: 101 RRYIIAPKGLRAGDKVQSGNDAPIRPGNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGASVQLLGR--DGSYAIIRLRSGEMRKVHVECRAVIGEVSNQENNLRSLGKAGAARW-----RGVRPTVRGMAMNPIDHPHGGGEGRNKG----IQPVSPWGQK 251
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_ACIB3 (50S ribosomal protein L2 OS=Acinetobacter baumannii (strain AB307-0294) GN=rplB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17 Identity = 56/162 (34.57%), Postives = 87/162 (53.70%), Query Frame = -3 Query: 245 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 730 R + + +G+ G V G A + GN LP+R++P G+ + NVE +G LAR++G ++ D ++L SG + + CRA+IG+V+ + L KAG A R P VRG+AMNP++HPHGGG ++ G ++ +P GQK Sbjct: 101 RRYIIAPKGLRAGDKVQSGNDAPIRPGNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGASVQLLGR--DGSYAIIRLRSGEMRKVHVECRAVIGEVSNQENNLRSLGKAGAARW-----RGVRPTVRGMAMNPIDHPHGGGEGRNKG----IQPVSPWGQK 251
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_ACAM1 (50S ribosomal protein L2 OS=Acaryochloris marina (strain MBIC 11017) GN=rplB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17 Identity = 55/142 (38.73%), Postives = 76/142 (53.52%), Query Frame = -3 Query: 305 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 730 + + L R + G + G A + VGN LP+ IP G V NVE G G LARA+G A +++ + +KLPSG ++ C A IGQV + KAG ++++ +R PKVRG MNPV+HPHGGG Sbjct: 101 KRYILHPRNVQVGTTIVAGPDAPIEVGNALPLERIPLGTEVHNVELIPGKGGQLARAAGALAQVVA--KEGKMVTLKLPSGEVRLFQKECYATIGQVGNVESNNITIGKAGR--NRWKARR---PKVRGSVMNPVDHPHGGG 235
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_TERTT (50S ribosomal protein L2 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=rplB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 51/148 (34.46%), Postives = 81/148 (54.73%), Query Frame = -3 Query: 287 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 730 R + + +G+ G F+ G + + VGN LP+R++P G+V+ +E G LAR++G +++ T R++ SG + + CRA +G+V+ + + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 101 RRYIIAPKGLKAGDFIESGDASAIKVGNTLPLRNVPVGSVIHCIELKPGKGAQLARSAGASVQLVAREGQYATLRLR--SGEMRKVEVECRATLGEVSNSEHSLRSLGKAG-----AKRWRGVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_STAAW (50S ribosomal protein L2 OS=Staphylococcus aureus (strain MW2) GN=rplB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 55/139 (39.57%), Postives = 77/139 (55.40%), Query Frame = -3 Query: 305 RGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 709 +G+ GQ V G +A + VGN LP+++IP G VV N+E G G +AR++G A ++ + ++L SG ++I S CRA IGQV G + L+ G A R+ W P VRG MNP +HPHGGG Sbjct: 108 KGLEVGQIVESGAEADIKVGNALPLQNIPVGTVVHNIELKPGKGGQIARSAGASAQVL--GKEGKYVLIRLRSGEVRMILSTCRATIGQV---GNLQHELVNVGKA------GRSRWKGIRPTVRGSVMNPNDHPHGGG 235
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_STAAS (50S ribosomal protein L2 OS=Staphylococcus aureus (strain MSSA476) GN=rplB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 55/139 (39.57%), Postives = 77/139 (55.40%), Query Frame = -3 Query: 305 RGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 709 +G+ GQ V G +A + VGN LP+++IP G VV N+E G G +AR++G A ++ + ++L SG ++I S CRA IGQV G + L+ G A R+ W P VRG MNP +HPHGGG Sbjct: 108 KGLEVGQIVESGAEADIKVGNALPLQNIPVGTVVHNIELKPGKGGQIARSAGASAQVL--GKEGKYVLIRLRSGEVRMILSTCRATIGQV---GNLQHELVNVGKA------GRSRWKGIRPTVRGSVMNPNDHPHGGG 235 The following BLAST results are available for this feature:
BLAST of CF834718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834718 ID=CF834718; Name=CF834718; organism=Citrus sinensis; type=EST; length=732bpback to top |