CF834718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_CHLSY (50S ribosomal protein L2 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rplB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 53/134 (39.55%), Postives = 76/134 (56.72%), Query Frame = -3 Query: 305 GMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 706 G+ G V G A + VGN LP+ +IP G + N+E +G GVL R++G A +++ + D V++PSG ++I C A IGQV L KAG + ++ +R P+VRG AMNP +HPHGGG Sbjct: 109 GLKVGDTVMSGPDAEIRVGNALPLSAIPLGTQIHNIELEIGRGGVLVRSAGTAAQLMA--KEGDYAIVRMPSGEMRMIHLRCMATIGQVGNVDHQNIRLGKAGRS--RWLGRR---PRVRGAAMNPRDHPHGGG 235
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_CHLPB (50S ribosomal protein L2 OS=Chlorobium phaeobacteroides (strain BS1) GN=rplB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 56/165 (33.94%), Postives = 85/165 (51.52%), Query Frame = -3 Query: 248 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQ 730 + + L +G+ G ++ G K + VGN +P+++IP GA V N+E G G +AR++G +A + + D+ T +KLPSG + + CRA IG + L KAG R+ W P+ RG+AMNPV+HP GGG + +P GQ Sbjct: 101 KRYILAPKGLKVGDVLHSGDKVDIKVGNSMPLKNIPLGADVHNIELKQGKGGQMARSAGAFATLAAKEGDHAT--LKLPSGEIRKVRIECRATIGGIGNDDHENIVLGKAG---------RSRWLGIRPQTRGMAMNPVDHPMGGGEGRSKSGGGRKHPKSPWGQ 254
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_CHLAA (50S ribosomal protein L2 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=rplB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 53/134 (39.55%), Postives = 76/134 (56.72%), Query Frame = -3 Query: 305 GMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 706 G+ G V G A + VGN LP+ +IP G + N+E +G GVL R++G A +++ + D V++PSG ++I C A IGQV L KAG + ++ +R P+VRG AMNP +HPHGGG Sbjct: 109 GLKVGDTVMSGPDAEIRVGNALPLSAIPLGTQIHNIELEIGRGGVLVRSAGTAAQLMA--KEGDYAIVRMPSGEMRMIHLRCMATIGQVGNVDHQNIRLGKAGRS--RWLGRR---PRVRGAAMNPRDHPHGGG 235
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_CELJU (50S ribosomal protein L2 OS=Cellvibrio japonicus (strain Ueda107) GN=rplB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 57/150 (38.00%), Postives = 81/150 (54.00%), Query Frame = -3 Query: 287 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKR--NCWPKVRGVAMNPVEHPHGGGNHQHIG 730 R + + +G+ G + G A + VGN LPVR+IP G+V+ VE G LAR++G A +++ D ++L SG + + S CRA +G+V+ + L KAG KR P VRGVAMNPV+HPHGGG + G Sbjct: 101 RRYIIAPKGLSAGDKIESGNAAAIKVGNTLPVRNIPLGSVIHCVELKPGKGAQLARSAGASAQLVA--KDGAYVTLRLRSGEMRKVLSDCRATLGEVSNTEHNLRSLGKAG-------AKRWLGIRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_BRASO (50S ribosomal protein L2 OS=Bradyrhizobium sp. (strain ORS278) GN=rplB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 50/147 (34.01%), Postives = 78/147 (53.06%), Query Frame = -3 Query: 287 SFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 727 ++ L + + G + G + GNV+P+ ++P G +V N+E +G G LAR++G YA ++ D+D V+L SG ++++ CR IG V+ + KAG R N RGVAMNP++HPHGGG + G Sbjct: 102 AYILAPQRLAVGDTIVAGNYVDVKPGNVMPLGNMPVGTIVHNIEVKIGKGGQLARSAGTYAQLVGR--DHDYVIVRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRKRWMGRRPHN-----RGVAMNPIDHPHGGGEGRTSG 241
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_BARHE (50S ribosomal protein L2 OS=Bartonella henselae GN=rplB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 52/147 (35.37%), Postives = 81/147 (55.10%), Query Frame = -3 Query: 287 SFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 727 S+ L + + G V G + GN +P+ ++P G ++ NVE G G +AR++G YA ++ D ++L SG ++++ SGC A +G V+ KAG + ++R +R P VRGVAMNPV+HPHGGG + G Sbjct: 102 SYILAPQRLDVGDSVIAGSNVDIKPGNAMPLGNMPVGTIIHNVEMKPGKGGQIARSAGAYAQLVGR--DQGMAILRLNSGEQRLVSSGCFATVGAVSNPDHANINDGKAGRS--RWRGRR---PHVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RK2_OLTVI (50S ribosomal protein L2, chloroplastic OS=Oltmannsiellopsis viridis GN=rpl2 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 53/142 (37.32%), Postives = 79/142 (55.63%), Query Frame = -3 Query: 305 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 730 + + L RG+ G + A ++ GN LP+++IP G V NVE G G LARA+G A I++ + + ++LPSG +++ + C A +GQV G T+ + G A K + + P VRGV MNP +HPHGGG Sbjct: 101 KRYILHPRGLNVGSSIISSLNAPVLTGNALPLKNIPLGGEVHNVELQPGAGGQLARAAGAVAQIVA--KEGNLVTLRLPSGEVRLVSNECWATVGQV---GNTDAINMVVGKAGRKRWLGKR--PHVRGVVMNPCDHPHGGG 235
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RK2_ADICA (50S ribosomal protein L2, chloroplastic OS=Adiantum capillus-veneris GN=rpl2 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 51/142 (35.92%), Postives = 79/142 (55.63%), Query Frame = -3 Query: 305 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 730 + + L +GM G V A++ GN LP+ +P G ++ N+E G L R++G A +I+ + ++LPSG +++P C A +G+V + K L KAG+ ++ +R PKVRG AMNPV+HPHGGG Sbjct: 98 KRYILHPKGMGIGDIVLSSPNASISAGNALPLTKMPLGTIIHNIELKSGRGAQLVRSAGTVAKVIAK--EGRLATLRLPSGEIRLVPRDCLASVGRVGNVDISNKGLKKAGSK--RWLGRR---PKVRGSAMNPVDHPHGGG 232
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_THISH (50S ribosomal protein L2 OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=rplB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17 Identity = 53/148 (35.81%), Postives = 81/148 (54.73%), Query Frame = -3 Query: 287 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 730 R + + +G+ G + G A + GN LP+R+IP G VV +E G +AR++G +++ + T R++ SG + +P+ CRA IG+V+ +E L K G A K + P VRG AMNPV+HPHGGG ++ G Sbjct: 101 RRYVIAPKGVQAGDQLLSGTNAPIRAGNTLPLRNIPVGTVVHCIEMKPGKGAQMARSAGAAVQLVAREGQHATLRLR--SGEMRKVPADCRATIGEVS---NSEHSLRKFGKAGAKRWL--GIRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF834718 vs. ExPASy Swiss-Prot
Match: RL2_SYNJB (50S ribosomal protein L2 OS=Synechococcus sp. GN=rplB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17 Identity = 53/142 (37.32%), Postives = 77/142 (54.23%), Query Frame = -3 Query: 305 RSFSLPLRGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 730 + + L R + G + G +A +GN +P+ IP G VV NVE + G G + RA+G A +++ + +KLPSG ++I C A IGQ+ L KAG + ++ +R PKVRG MNPV+HPHGGG Sbjct: 107 KRYILAPRNLQVGSTIMAGPEAPFEIGNAMPLERIPLGTVVHNVELYPGRGGQMVRAAGAGAQVVAR--EGKYVSLKLPSGEVRMIRGECYATIGQLGNVDHNNISLGKAGRS--RWLGRR---PKVRGSVMNPVDHPHGGG 241 The following BLAST results are available for this feature:
BLAST of CF834718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834718 ID=CF834718; Name=CF834718; organism=Citrus sinensis; type=EST; length=732bpback to top |