CF834719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_NEIMF (50S ribosomal protein L2 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=rplB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 70/210 (33.33%), Postives = 104/210 (49.52%), Query Frame = 3 Query: 30 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 I + KG G H HH +R +DF + V I +DP R A +A + + ++ IA G+ G + G +A + VGN LP+R+IP G + +E G +AR++G AV+++ + +V+L SG + I CRA IG+V ++ K + KAG N + R P VRGV MNPV+HPHGG Sbjct: 49 ITTRHKGGG-----HKHH------YRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADG-----ERRYIIAPRGIQAGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLA--KEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIR------PTVRGVVMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_NEIMA (50S ribosomal protein L2 OS=Neisseria meningitidis serogroup A GN=rplB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 70/210 (33.33%), Postives = 104/210 (49.52%), Query Frame = 3 Query: 30 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 I + KG G H HH +R +DF + V I +DP R A +A + + ++ IA G+ G + G +A + VGN LP+R+IP G + +E G +AR++G AV+++ + +V+L SG + I CRA IG+V ++ K + KAG N + R P VRGV MNPV+HPHGG Sbjct: 49 ITTRHKGGG-----HKHH------YRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADG-----ERRYIIAPRGIQAGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLA--KEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIR------PTVRGVVMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_MYCA5 (50S ribosomal protein L2 OS=Mycoplasma arthritidis (strain 158L3-1) GN=rplB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 67/205 (32.68%), Postives = 102/205 (49.76%), Query Frame = 3 Query: 48 GAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 G + K T H G + +R +DF + V I +DP R A ++ V + +K I+ +G+ GQ + G++ + +GN LP+++IPEG V N+E GV+AR++G A I+ + ++L SG + I + CRA +G+V G E L+ G A R P VRG AMNP +HPHGG Sbjct: 43 GRNNQGKITTRHHGGRLKRFYRLVDFKRNKDDILATVKTIEYDPNRSANISLVVYADG-----EKRYIISPKGLKVGQKIISGEQVDIQIGNSLPLKNIPEGTYVHNIEMQPKQGGVIARSAGSSAQILGKDETGRYIILRLKSGEVRKILALCRATVGEV---GNEEHSLVNIGKAGR--NRLRGIRPTVRGSAMNPNDHPHGG 237
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_JANSC (50S ribosomal protein L2 OS=Jannaschia sp. (strain CCS1) GN=rplB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 65/209 (31.10%), Postives = 100/209 (47.85%), Query Frame = 3 Query: 30 IRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 I A+R+G G+ +R +DF + V I +DP R A +A V + ++ +A + + G V KKA + GN +P +P G +V N+E G G +ARA+G YA + D +++L SG +++ C A +G V+ + + L KAG H + P VRGVAMNP++HPHGG Sbjct: 49 ITARRRGGGA-----------KRLYRIVDFKRTKFDVSATVERIEYDPNRTAFIALVRYEDG-----EQNYILAPQRLGVGDKVVASKKADIKPGNAMPFSGLPIGTIVHNIELKPGKGGQIARAAGTYAQFVGR--DGGYAQIRLSSGELRLVRQECMATVGAVSNPDNSNQNLGKAGRVRHMGK-----RPSVRGVAMNPIDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_HAEIN (50S ribosomal protein L2 OS=Haemophilus influenzae GN=rplB PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 65/186 (34.95%), Postives = 98/186 (52.69%), Query Frame = 3 Query: 102 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G + + VGN LP+R+IP G+ V NVE G G +AR++G Y II+ + T R++ SG + + + C A IG+V + L KAG N + R P VRG AMNPV+HPHGG Sbjct: 62 YRLIDFKRNKLDIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLSVGDQIQAGINSPIKVGNSLPMRNIPVGSTVHNVELKPGKGGQIARSAGAYVQIIAREGNYVTLRLR--SGEMRKVLAECVATIGEVGNSEHMLRVLGKAGANRWRGIR------PTVRGTAMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_HAEIG (50S ribosomal protein L2 OS=Haemophilus influenzae (strain PittGG) GN=rplB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 65/186 (34.95%), Postives = 98/186 (52.69%), Query Frame = 3 Query: 102 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G + + VGN LP+R+IP G+ V NVE G G +AR++G Y II+ + T R++ SG + + + C A IG+V + L KAG N + R P VRG AMNPV+HPHGG Sbjct: 62 YRLIDFKRNKLDIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLSVGDQIQAGINSPIKVGNSLPMRNIPVGSTVHNVELKPGKGGQIARSAGAYVQIIAREGNYVTLRLR--SGEMRKVLAECVATIGEVGNSEHMLRVLGKAGANRWRGIR------PTVRGTAMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_HAEIE (50S ribosomal protein L2 OS=Haemophilus influenzae (strain PittEE) GN=rplB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 65/186 (34.95%), Postives = 98/186 (52.69%), Query Frame = 3 Query: 102 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G + + VGN LP+R+IP G+ V NVE G G +AR++G Y II+ + T R++ SG + + + C A IG+V + L KAG N + R P VRG AMNPV+HPHGG Sbjct: 62 YRLIDFKRNKLDIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLSVGDQIQAGINSPIKVGNSLPMRNIPVGSTVHNVELKPGKGGQIARSAGAYVQIIAREGNYVTLRLR--SGEMRKVLAECVATIGEVGNSEHMLRVLGKAGANRWRGIR------PTVRGTAMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_HAEI8 (50S ribosomal protein L2 OS=Haemophilus influenzae (strain 86-028NP) GN=rplB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 65/186 (34.95%), Postives = 98/186 (52.69%), Query Frame = 3 Query: 102 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G + + VGN LP+R+IP G+ V NVE G G +AR++G Y II+ + T R++ SG + + + C A IG+V + L KAG N + R P VRG AMNPV+HPHGG Sbjct: 62 YRLIDFKRNKLDIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLSVGDQIQAGINSPIKVGNSLPMRNIPVGSTVHNVELKPGKGGQIARSAGAYVQIIAREGNYVTLRLR--SGEMRKVLAECVATIGEVGNSEHMLRVLGKAGANRWRGIR------PTVRGTAMNPVDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_CLONN (50S ribosomal protein L2 OS=Clostridium novyi (strain NT) GN=rplB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 73/209 (34.93%), Postives = 101/209 (48.33%), Query Frame = 3 Query: 39 QRKGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYH-KFRVKRNCWPKVRGVAMNPVEHPHGG 656 ++ G S K HR G A+ +R +DF + VA I +DP R A +A V + +K IA G+ G V G A + VGN LP+++IP G V+ NVE G L RA+G A +++ + ++LPSG + + CRA IG V+ + KAG H FR P VRG MNP +HPHGG Sbjct: 39 KKAGRNSQGKITVRHRGGGAKRKYRIIDFKRTKDGIPAKVASIEYDPNRTAYIALVVYADG-----EKRYIIAPVGLKVGDVVMSGVDADIKVGNALPLKNIPVGTVIHNVELQAGKGAQLVRAAGSSAQLMA--KEGKYAILRLPSGEMRYVRIECRAAIGTVSNVTNDIINIGKAGRKRHLGFR------PTVRGSVMNPNDHPHGG 234
BLAST of CF834719 vs. ExPASy Swiss-Prot
Match: RL2_CHLSY (50S ribosomal protein L2 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rplB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 74/215 (34.42%), Postives = 108/215 (50.23%), Query Frame = 3 Query: 24 RVIRAQRKGAGSVFKSH--THHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 656 R+I RK AG + HR G + +R +DF + V I +DP R A +A + + +K IA G+ G V G A + VGN LP+ +IP G + N+E +G GVL R++G A +++ + D V++PSG ++I C A IGQV L KAG + ++ +R P+VRG AMNP +HPHGG Sbjct: 32 RLIEPLRKKAGRNNQGRITVRHRGGGHKRFYRIIDFKRNKFGVPAKVQAIEYDPNRTARIALLAYADG-----EKRYIIAPLGLKVGDTVMSGPDAEIRVGNALPLSAIPLGTQIHNIELEIGRGGVLVRSAGTAAQLMA--KEGDYAIVRMPSGEMRMIHLRCMATIGQVGNVDHQNIRLGKAGRS--RWLGRR---PRVRGAAMNPRDHPHGG 234 The following BLAST results are available for this feature:
BLAST of CF834719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834719 ID=CF834719; Name=CF834719; organism=Citrus sinensis; type=EST; length=656bpback to top |