CF834725

Overview
NameCF834725
Unique NameCF834725
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13137 contig Csv1_Contig13137:48..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL1_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c1/c3/c5 OS=Arabidopsis thaliana GN=VHA-C1 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.030e-55
Identity = 118/161 (73.29%), Postives = 119/161 (73.91%), Query Frame = 1
Query:  115 FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 597
            FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:    4 FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_TOBAC (V-type proton ATPase 16 kDa proteolipid subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55
Identity = 120/166 (72.29%), Postives = 121/166 (72.89%), Query Frame = 1
Query:  100 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 597
            M ST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPK KSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:    1 MPST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKTKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_SOLLC (V-type proton ATPase 16 kDa proteolipid subunit OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.964e-54
Identity = 116/161 (72.05%), Postives = 118/161 (73.29%), Query Frame = 1
Query:  115 FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 597
            F+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPK KSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:    4 FAGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKTKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_MAIZE (V-type proton ATPase 16 kDa proteolipid subunit (Fragment) OS=Zea mays PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 8.578e-34
Identity = 79/109 (72.48%), Postives = 79/109 (72.48%), Query Frame = 1
Query:  271 VPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 597
            VPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    1 VPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 109          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_PLECA (V-type proton ATPase 16 kDa proteolipid subunit OS=Pleurochrysis carterae GN=VAP PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.760e-32
Identity = 81/152 (53.29%), Postives = 96/152 (63.16%), Query Frame = 1
Query:  130 TAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGI-NPKA--KSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 576
            TAP             + +GAAYGTAKSGVGV+SMGVM+P+LVMKSI+PVVMAGVLGIYGLIIAVII  G+  P+     Y  F G+                 +AIGIVGDAGVRA+AQQ KL+VGM            YGLIVG+IL+S+
Sbjct:    8 TAPFFGFMGAAVALIFANLGAAYGTAKSGVGVSSMGVMKPDLVMKSIIPVVMAGVLGIYGLIIAVIIGNGVKGPEGGKPQYSSFTGFAHLAAGLACGLSGMAAGIAIGIVGDAGVRASAQQAKLYVGMVLILIFAEALGLYGLIVGLILTSK 159          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_HELVI (V-type proton ATPase 16 kDa proteolipid subunit OS=Heliothis virescens GN=VHA16 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.514e-30
Identity = 67/133 (50.38%), Postives = 87/133 (65.41%), Query Frame = 1
Query:  178 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 576
            S +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+  ++  + +Y L+ G+                  AIGIVGDAGVR  AQQP+LFVGM            YGLIV I L ++
Sbjct:   23 SALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGSLDAPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 155          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_NEUCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Neurospora crassa GN=vma-3 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.978e-30
Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 1
Query:  178 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRA 579
            +C+GA+YGTAKSGVG+A+MGV+RP+L++K+IVPV+MAG++GIYGL+++V+IS  +      Y L+ G+                  AIGIVGDAGVR  AQQP+LFVGM            YGLIV ++++S+A
Sbjct:   24 TCLGASYGTAKSGVGIAAMGVLRPDLIVKNIVPVIMAGIIGIYGLVVSVLISDALT--QDHYALYTGFIQLGAGLAVGLAGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALLMNSKA 155          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_MANSE (V-type proton ATPase 16 kDa proteolipid subunit OS=Manduca sexta GN=VHA16 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.978e-30
Identity = 67/133 (50.38%), Postives = 87/133 (65.41%), Query Frame = 1
Query:  178 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 576
            S +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+  ++  + +Y L+ G+                  AIGIVGDAGVR  AQQP+LFVGM            YGLIV I L ++
Sbjct:   23 SALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGSLDSPSNNYTLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 155          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_AEDAE (V-type proton ATPase 16 kDa proteolipid subunit OS=Aedes aegypti GN=AAEL000291 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.674e-29
Identity = 68/133 (51.13%), Postives = 86/133 (64.66%), Query Frame = 1
Query:  178 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 576
            S +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+  ++   K Y L+ G+                  AIGIVGDAGVR  AQQP+LFVGM            YGLIV I L ++
Sbjct:   26 SALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGSLDTPTK-YSLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 157          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_DROME (V-type proton ATPase 16 kDa proteolipid subunit OS=Drosophila melanogaster GN=Vha16 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.187e-29
Identity = 68/133 (51.13%), Postives = 86/133 (64.66%), Query Frame = 1
Query:  178 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 576
            S +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+  +   +K Y L+ G+                  AIGIVGDAGVR  AQQP+LFVGM            YGLIV I L ++
Sbjct:   28 SALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALEEPSK-YSLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 159          
The following BLAST results are available for this feature:
BLAST of CF834725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL1_ARATH3.030e-5573.29V-type proton ATPase 16 kDa proteolipid subunit c1... [more]
VATL_TOBAC6.750e-5572.29V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_SOLLC1.964e-5472.05V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_MAIZE8.578e-3472.48V-type proton ATPase 16 kDa proteolipid subunit (F... [more]
VATL_PLECA2.760e-3253.29V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_HELVI1.514e-3050.38V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_NEUCR1.978e-3048.51V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_MANSE1.978e-3050.38V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_AEDAE1.674e-2951.13V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_DROME2.187e-2951.13V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834725 ID=CF834725; Name=CF834725; organism=Citrus sinensis; type=EST; length=674bp
TTTAGAACTCTTTAGTCTCCTCTTGAGAGAAAGAGCACAGAACGAATAAC
GAAAACAAAACACACGCTCAAGTCTCAGATCCAGTCCGCATCTCCCAAGA
TGTCTTCAACATTATTCAGTGGCGATGAAACCGCTCCTTTCTTCGGCTTT
CTCGGCGCCGCTGCCGCCCTAGTCTTTTCCTGTATGGGAGCTGCGTACGG
AACGGCGAAGAGTGGCGTCGGTGTGGCGTCGATGGGAGTGATGAGGCCGG
AGCTTGTGATGAAATCGATCGTGCCCGTTGTTATGGCGGGAGTTTTGGGT
ATTTACGGTTTGATTATTGCTGTTATTATTAGTACCGGAATTAACCCTAA
GGCCAAATCTTATTACCTTTTCGATGGCTACGCGCATCTCTCTTCTGGCC
TCGCTTGTGGCCTTGCTGGTCTCTCCGCTGGTATGGCAATTGGGATCGTC
GGTGATGCTGGTGTCAGAGCCAATGCTCAACAGCCGAAGCTTTTCGTTGG
GATGATCCTCATTCTGATCTTTGCTGAAGCGCTGGCACTTTATGGACTTA
TTGTTGGTATCATTCTTTCTTCTCGTGCTGGTCAGTCAAGAGCAGACTAG
AAGAGGATGCTTTGCTTGGTGTTTATTTGGCCTGTTGTGTTCCATTAAGA
AGAATTCAGTTCATATTGCCTGTG
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