CF834725
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL2_SCHPO (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Schizosaccharomyces pombe GN=vma11 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.622e-24 Identity = 55/133 (41.35%), Postives = 84/133 (63.16%), Query Frame = 1 Query: 178 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 576 SC+GA YGTA +G G+A++G RPE+VMKS++PVVM+G++G+YGL+++V+I+ ++P Y LF G+ AIG+VGD GV++ +Q ++FV M YGLIVG+IL ++ Sbjct: 25 SCLGAGYGTALAGRGIAAVGAFRPEIVMKSLIPVVMSGIIGVYGLVMSVLIAGDMSPD-NDYSLFSGFIHLSAGLAVGLTGVAAGYAIGVVGDRGVQSFMRQDRIFVSMVLILIFAEVLGLYGLIVGLILQTK 156
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL2_NEUCR (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Neurospora crassa GN=vma-11 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.373e-23 Identity = 54/133 (40.60%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 187 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINP--KAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRA 579 GAAYGTAKSG+G+A +G RP+L+MK ++PVVM+G++ +Y L++AV+I+ + P + Y LF+G+ IGIVGD GVR+ Q ++FVGM YGLIV +IL++++ Sbjct: 33 GAAYGTAKSGIGIAGVGTFRPDLIMKCLIPVVMSGIIAVYALVVAVLIAQDLGPPGSGQHYSLFNGFMHLACGLSVGLTGLAAGYCIGIVGDKGVRSFMLQSRIFVGMVLILIFGEVLGLYGLIVALILNTKS 165
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_ENTHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Entamoeba histolytica GN=VMA3 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.793e-23 Identity = 58/134 (43.28%), Postives = 77/134 (57.46%), Query Frame = 1 Query: 187 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQS 588 G AYGTAKS VG++S+GVM+PE +++S+ PVV AG++G+YGLI+ +++ IN Y L + MAIGI GD GVR AQQPKLFVGM YG IV +I++S S Sbjct: 36 GGAYGTAKSSVGISSVGVMKPEFIVRSVAPVVFAGIIGLYGLIVCILLF--INVTKSEYSLNRAFLDLGAGLTCGLCGLASGMAIGISGDCGVRGAAQQPKLFVGMLICLIFSEALALYGFIVALIMASTGENS 167
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_ENTDI (V-type proton ATPase 16 kDa proteolipid subunit OS=Entamoeba dispar GN=VMA3 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 8.898e-23 Identity = 57/134 (42.54%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 187 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQS 588 G AYGTAKS VG++S+GVM+PE +M+S+ PVV AGV+G+YGLI+ +++ IN Y L + M+IGI GD GVR AQQPKLFV M YG IV +I+++ S Sbjct: 34 GGAYGTAKSSVGISSVGVMKPEFIMRSLFPVVFAGVIGLYGLIVCIVLF--INVNKSEYSLNRAFLDLGAGLTCGLCGLASGMSIGISGDCGVRGAAQQPKLFVSMLICLIFSEALALYGFIVALIMAATGDNS 165 The following BLAST results are available for this feature:
BLAST of CF834725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834725 ID=CF834725; Name=CF834725; organism=Citrus sinensis; type=EST; length=674bpback to top |