CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSA (Chaperone protein htpG OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=htpG PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.641e-20
Identity = 50/97 (51.55%), Postives = 70/97 (72.16%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA--DVS 703
            ++ YSNKEIFLRELISN+SD+ D++R+ ++T+   LD   E  I ++PDK   +L+IID+G GM+  +L+ NLGTIA+SGT EF+  L   A  DVS
Sbjct:   21 HSLYSNKEIFLRELISNASDSCDRLRYGAITEPDLLDGDSEFRIRLVPDKDAGTLTIIDNGQGMSHDELIANLGTIAKSGTSEFLARLTGDAKKDVS 117          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_AERS4 (Chaperone protein htpG OS=Aeromonas salmonicida (strain A449) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.641e-20
Identity = 46/89 (51.69%), Postives = 69/89 (77.53%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKE+FLRELISN+SDA DK+RF++L+D S  +   +L + ++ DK N +L+I D+GIGMT+  ++ +LGTIA+SGT EF + L+
Sbjct:   25 HSLYSNKEVFLRELISNASDAADKLRFKALSDASLFENDGQLRVRLVVDKENRTLTISDNGIGMTRDQVIEHLGTIAKSGTAEFFKNLS 113          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_AERHH (Chaperone protein htpG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.641e-20
Identity = 46/89 (51.69%), Postives = 69/89 (77.53%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKE+FLRELISN+SDA DK+RF++L+D S  +   +L + ++ DK N +L+I D+GIGMT+  ++ +LGTIA+SGT EF + L+
Sbjct:   25 HSLYSNKEVFLRELISNASDAADKLRFKALSDASLFENDGQLRVRLVVDKENRTLTISDNGIGMTRDQVIEHLGTIAKSGTAEFFKNLS 113          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_RALEJ (Chaperone protein htpG OS=Ralstonia eutropha (strain JMP134) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20
Identity = 48/89 (53.93%), Postives = 66/89 (74.16%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN+SDA DK+RFE++ + S L+   +L I I  D    +L I D+GIGM++ + + NLGTIARSGTKEF + L+
Sbjct:   23 HSLYSNKEIFLRELVSNASDATDKLRFEAIANPSLLENDADLAIRIEADTAARTLKITDNGIGMSRDEAIRNLGTIARSGTKEFFQQLS 111          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_METFK (Chaperone protein htpG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=htpG1 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20
Identity = 47/88 (53.41%), Postives = 68/88 (77.27%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNKEI LRELISN+SDA DK+RFE+L D S      +L I +  DK   +++I D+GIGM++ +++NN+GTIA+SGTKEF+++L
Sbjct:   26 HSLYSNKEIVLRELISNASDAADKLRFEALADNSLYGNDSDLKIRVSFDKQARTITISDNGIGMSREEVINNIGTIAKSGTKEFLQSL 113          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BAUCH (Chaperone protein htpG OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=htpG PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20
Identity = 46/88 (52.27%), Postives = 67/88 (76.14%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNKEIFLRELISN+SDA DK+RF +L      +   EL++ II +K   +++IID+GIGM + ++++NLGTIA+SGTK F+E +
Sbjct:   24 HSLYSNKEIFLRELISNASDAADKLRFLALAKPDLYEGNGELYVRIICNKEKRTITIIDNGIGMCRTEVIDNLGTIAKSGTKAFLETI 111          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_WIGBR (Chaperone protein htpG OS=Wigglesworthia glossinidia brevipalpis GN=htpG PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 49/88 (55.68%), Postives = 69/88 (78.41%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNKEIFLRELISN+SDALDK+RF S++D+     Q +L I I  DK   S++I D+GIGM+K +++ NLGTIA+SGTK F++++
Sbjct:   22 HSLYSNKEIFLRELISNASDALDKLRFLSISDEKIKIKQNKLCIFIDYDKNKKSITIQDNGIGMSKKEVIENLGTIAKSGTKSFIKSI 109          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_THIDA (Chaperone protein htpG OS=Thiobacillus denitrificans (strain ATCC 25259) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 46/89 (51.69%), Postives = 70/89 (78.65%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNK+IFLRELISN+SDA DK+RFE+L+D +  +  PEL I I  D+   +L+I D+GIGM++ ++++++GTIA+SGT+EF   L+
Sbjct:   25 HSLYSNKDIFLRELISNASDAADKLRFEALSDAALFENDPELKIRIAFDRDARTLTISDNGIGMSRQEVIDHIGTIAKSGTREFFSQLS 113          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_SHIDS (Chaperone protein htpG OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 46/90 (51.11%), Postives = 69/90 (76.67%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YSNKEIFLRELISN+SDA DK+RF SL++    +   EL + +  DK   +L+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   22 HSLYSNKEIFLRELISNASDAADKLRFRSLSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSM (Chaperone protein htpG OS=Magnetococcus sp. (strain MC-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 48/88 (54.55%), Postives = 67/88 (76.14%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            +  YSNKEIFLRELISN+SDA DK+RF  L+D S  +   EL I +  DK   + SI+D+GIGM++ ++++N+GTIA+SGTKEF ++L
Sbjct:   25 HALYSNKEIFLRELISNASDANDKLRFAGLSDDSLFEGDSELTIKLEFDKEAGTFSIMDNGIGMSRDEVISNIGTIAKSGTKEFFKSL 112          
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_MAGSA2.641e-2051.55Chaperone protein htpG OS=Magnetospirillum magneti... [more]
HTPG_AERS42.641e-2051.69Chaperone protein htpG OS=Aeromonas salmonicida (s... [more]
HTPG_AERHH2.641e-2051.69Chaperone protein htpG OS=Aeromonas hydrophila sub... [more]
HTPG_RALEJ3.450e-2053.93Chaperone protein htpG OS=Ralstonia eutropha (stra... [more]
HTPG_METFK3.450e-2053.41Chaperone protein htpG OS=Methylobacillus flagella... [more]
HTPG_BAUCH3.450e-2052.27Chaperone protein htpG OS=Baumannia cicadellinicol... [more]
HTPG_WIGBR4.506e-2055.68Chaperone protein htpG OS=Wigglesworthia glossinid... [more]
HTPG_THIDA4.506e-2051.69Chaperone protein htpG OS=Thiobacillus denitrifica... [more]
HTPG_SHIDS4.506e-2051.11Chaperone protein htpG OS=Shigella dysenteriae ser... [more]
HTPG_MAGSM4.506e-2054.55Chaperone protein htpG OS=Magnetococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
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