CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CUPTR (Chaperone protein htpG OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 48/89 (53.93%), Postives = 66/89 (74.16%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN+SDA DK+RFE++ + S L+   +L I I  D    +L I D+GIGM++ + + NLGTIARSGTKEF + L+
Sbjct:   23 HSLYSNKEIFLRELVSNASDATDKLRFEAIANPSLLENDADLAIRIEADAKARTLKITDNGIGMSRDEAIRNLGTIARSGTKEFFQQLS 111          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BURTA (Chaperone protein htpG OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 48/89 (53.93%), Postives = 67/89 (75.28%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN+SDA DK+RFE+L + +  ++ P L I +  DK   +L+I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:   21 HSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTLTIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BURCH (Chaperone protein htpG OS=Burkholderia cenocepacia (strain HI2424) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN+SDA DK+RFE L D +  +  P L I I  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:   21 HSLYSNKEIFLRELVSNASDAADKLRFEGLADNALYENDPNLRIRIGYDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFTKLS 109          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BURCA (Chaperone protein htpG OS=Burkholderia cenocepacia (strain AU 1054) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN+SDA DK+RFE L D +  +  P L I I  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:   21 HSLYSNKEIFLRELVSNASDAADKLRFEGLADNALYENDPNLRIRIGYDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFTKLS 109          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_ARCB4 (Chaperone protein htpG OS=Arcobacter butzleri (strain RM4018) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 52/94 (55.32%), Postives = 73/94 (77.66%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD--AQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 694
            ++ YSNKEIF+REL+SN+SDA+DK+ +  LTD++  D  AQ +  I+I  D+ + SLSIID+GIGM +ADL+ ++GTIA+SGTK F+EAL   A
Sbjct:   19 HSLYSNKEIFIRELVSNASDAIDKLNYLRLTDENLKDKYAQWKGEINISFDEKDKSLSIIDNGIGMNEADLIASIGTIAKSGTKSFVEALTGDA 112          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_SULNB (Chaperone protein htpG OS=Sulfurovum sp. (strain NBC37-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.884e-20
Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 694
            ++ YSNKEIF+RELISN+SDALDK  + SLTD+   +      I I  DK +NSL+I D+GIGM + DL++NLGTIA+SGTK FME L   A
Sbjct:   19 HSLYSNKEIFIRELISNASDALDKFNYLSLTDEKFKEENWSGKISIKLDKDDNSLTIGDNGIGMNEEDLMDNLGTIAKSGTKAFMENLTGDA 110          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_GEOUR (Chaperone protein htpG OS=Geobacter uraniireducens (strain Rf4) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.884e-20
Identity = 47/88 (53.41%), Postives = 67/88 (76.14%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNK+IFLREL+SN+SDA+DK++FES ++   L+   +  I +IPDKT  +L+I D+GIGM   ++  N+GTIARSGT+ FME L
Sbjct:   21 HSLYSNKDIFLRELVSNASDAIDKVKFESHSNMDILEGNTDWKIKLIPDKTAGTLTIRDNGIGMNVVEVEENIGTIARSGTRAFMENL 108          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_COXBU (Chaperone protein htpG OS=Coxiella burnetii GN=htpG PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.884e-20
Identity = 48/89 (53.93%), Postives = 69/89 (77.53%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLRELISNSSDA DK+R+++L+D +  +   +L I I  DK N +++I D+GIGM++ +++ NLGTIA+SGT+ F E LA
Sbjct:   25 HSLYSNKEIFLRELISNSSDAADKLRYQALSDAALYENDADLKIWIDFDKDNRTITIRDNGIGMSREEVIENLGTIAKSGTRAFRELLA 113          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_COXBR (Chaperone protein htpG OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.884e-20
Identity = 48/89 (53.93%), Postives = 69/89 (77.53%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLRELISNSSDA DK+R+++L+D +  +   +L I I  DK N +++I D+GIGM++ +++ NLGTIA+SGT+ F E LA
Sbjct:   25 HSLYSNKEIFLRELISNSSDAADKLRYQALSDAALYENDADLKIWIDFDKDNRTITIRDNGIGMSREEVIENLGTIAKSGTRAFRELLA 113          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_COXBN (Chaperone protein htpG OS=Coxiella burnetii (strain Dugway 5J108-111) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.884e-20
Identity = 48/89 (53.93%), Postives = 69/89 (77.53%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLRELISNSSDA DK+R+++L+D +  +   +L I I  DK N +++I D+GIGM++ +++ NLGTIA+SGT+ F E LA
Sbjct:   25 HSLYSNKEIFLRELISNSSDAADKLRYQALSDAALYENDADLKIWIDFDKDNRTITIRDNGIGMSREEVIENLGTIAKSGTRAFRELLA 113          
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_CUPTR4.506e-2053.93Chaperone protein htpG OS=Cupriavidus taiwanensis ... [more]
HTPG_BURTA4.506e-2053.93Chaperone protein htpG OS=Burkholderia thailandens... [more]
HTPG_BURCH4.506e-2055.06Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_BURCA4.506e-2055.06Chaperone protein htpG OS=Burkholderia cenocepacia... [more]
HTPG_ARCB44.506e-2055.32Chaperone protein htpG OS=Arcobacter butzleri (str... [more]
HTPG_SULNB5.884e-2057.61Chaperone protein htpG OS=Sulfurovum sp. (strain N... [more]
HTPG_GEOUR5.884e-2053.41Chaperone protein htpG OS=Geobacter uraniireducens... [more]
HTPG_COXBU5.884e-2053.93Chaperone protein htpG OS=Coxiella burnetii GN=htp... [more]
HTPG_COXBR5.884e-2053.93Chaperone protein htpG OS=Coxiella burnetii (strai... [more]
HTPG_COXBN5.884e-2053.93Chaperone protein htpG OS=Coxiella burnetii (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
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