CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BURPS (Chaperone protein htpG OS=Burkholderia pseudomallei GN=htpG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN+SDA DK+RFE+L + +  ++ P L I +  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:   21 HSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BURP6 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 668) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN+SDA DK+RFE+L + +  ++ P L I +  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:   21 HSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BURP1 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 1710b) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN+SDA DK+RFE+L + +  ++ P L I +  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:   21 HSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BURP0 (Chaperone protein htpG OS=Burkholderia pseudomallei (strain 1106a) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN+SDA DK+RFE+L + +  ++ P L I +  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:   21 HSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BURMS (Chaperone protein htpG OS=Burkholderia mallei (strain SAVP1) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN+SDA DK+RFE+L + +  ++ P L I +  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:   21 HSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BURMA (Chaperone protein htpG OS=Burkholderia mallei GN=htpG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN+SDA DK+RFE+L + +  ++ P L I +  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:   21 HSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BURM9 (Chaperone protein htpG OS=Burkholderia mallei (strain NCTC 10229) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN+SDA DK+RFE+L + +  ++ P L I +  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:   21 HSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BURM7 (Chaperone protein htpG OS=Burkholderia mallei (strain NCTC 10247) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN+SDA DK+RFE+L + +  ++ P L I +  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:   21 HSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_VIBCM (Chaperone protein htpG OS=Vibrio cholerae serotype O1 (strain M66-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLRELISN+SDA+DK+RF++L+         EL + +  DK  N+L+I D+GIGMT+ +++ NLGTIA+SGT EF   L+
Sbjct:   27 HSLYSNKEIFLRELISNASDAVDKLRFQALSHPDLYQGDAELGVKLSFDKDKNTLTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLS 115
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_VIBCH (Chaperone protein htpG OS=Vibrio cholerae GN=htpG PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLRELISN+SDA+DK+RF++L+         EL + +  DK  N+L+I D+GIGMT+ +++ NLGTIA+SGT EF   L+
Sbjct:   27 HSLYSNKEIFLRELISNASDAVDKLRFQALSHPDLYQGDAELGVKLSFDKDKNTLTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLS 115
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_BURPS7.685e-2052.81Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP67.685e-2052.81Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP17.685e-2052.81Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURP07.685e-2052.81Chaperone protein htpG OS=Burkholderia pseudomalle... [more]
HTPG_BURMS7.685e-2052.81Chaperone protein htpG OS=Burkholderia mallei (str... [more]
HTPG_BURMA7.685e-2052.81Chaperone protein htpG OS=Burkholderia mallei GN=h... [more]
HTPG_BURM97.685e-2052.81Chaperone protein htpG OS=Burkholderia mallei (str... [more]
HTPG_BURM77.685e-2052.81Chaperone protein htpG OS=Burkholderia mallei (str... [more]
HTPG_VIBCM1.004e-1952.81Chaperone protein htpG OS=Vibrio cholerae serotype... [more]
HTPG_VIBCH1.004e-1952.81Chaperone protein htpG OS=Vibrio cholerae GN=htpG ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
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