CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLI (Chaperone protein htpG OS=Escherichia coli (strain K12) GN=htpG PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 45/90 (50.00%), Postives = 69/90 (76.67%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   +L+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   22 HSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLC (Chaperone protein htpG OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 45/90 (50.00%), Postives = 69/90 (76.67%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   +L+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   22 HSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL6 (Chaperone protein htpG OS=Escherichia coli O6 GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 45/90 (50.00%), Postives = 69/90 (76.67%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   +L+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   22 HSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL5 (Chaperone protein htpG OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 45/90 (50.00%), Postives = 69/90 (76.67%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   +L+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   22 HSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_ECOK1 (Chaperone protein htpG OS=Escherichia coli O1:K1 / APEC GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 45/90 (50.00%), Postives = 69/90 (76.67%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   +L+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   22 HSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_ECOHS (Chaperone protein htpG OS=Escherichia coli O9:H4 (strain HS) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 45/90 (50.00%), Postives = 69/90 (76.67%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   +L+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   22 HSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_ECO57 (Chaperone protein htpG OS=Escherichia coli O157:H7 GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 45/90 (50.00%), Postives = 69/90 (76.67%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   +L+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   22 HSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_ECO24 (Chaperone protein htpG OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 45/90 (50.00%), Postives = 69/90 (76.67%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   +L+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   22 HSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBJ (Chaperone protein htpG OS=Clostridium botulinum (strain Kyoto / Type A2) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 47/84 (55.95%), Postives = 64/84 (76.19%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEF 670
            N+ Y++KEIFLRELISNSSDA+DKI +++LTD S    + + +I ++ DK N  L I D+GIGMTK +L NNLG IA+SG+ +F
Sbjct:   19 NSIYTHKEIFLRELISNSSDAIDKIYYKTLTDDSLKFERDDYYIRVVSDKENRILKIADTGIGMTKEELENNLGVIAKSGSLQF 102
[Close]
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CLOB6 (Chaperone protein htpG OS=Clostridium botulinum (strain 657 / Type Ba4) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 47/84 (55.95%), Postives = 64/84 (76.19%), Query Frame = 2 
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEF 670
            N+ Y++KEIFLRELISNSSDA+DKI +++LTD S    + + +I ++ DK N  L I D+GIGMTK +L NNLG IA+SG+ +F
Sbjct:   19 NSIYTHKEIFLRELISNSSDAIDKIYYKTLTDDSLKFERDDYYIRVVSDKENRILKIADTGIGMTKEELENNLGVIAKSGSLQF 102
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_ECOLI1.004e-1950.00Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOLC1.004e-1950.00Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOL61.004e-1950.00Chaperone protein htpG OS=Escherichia coli O6 GN=h... [more]
HTPG_ECOL51.004e-1950.00Chaperone protein htpG OS=Escherichia coli O6:K15:... [more]
HTPG_ECOK11.004e-1950.00Chaperone protein htpG OS=Escherichia coli O1:K1 /... [more]
HTPG_ECOHS1.004e-1950.00Chaperone protein htpG OS=Escherichia coli O9:H4 (... [more]
HTPG_ECO571.004e-1950.00Chaperone protein htpG OS=Escherichia coli O157:H7... [more]
HTPG_ECO241.004e-1950.00Chaperone protein htpG OS=Escherichia coli O139:H2... [more]
HTPG_CLOBJ1.004e-1955.95Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CLOB61.004e-1955.95Chaperone protein htpG OS=Clostridium botulinum (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
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