CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_SHEON (Chaperone protein htpG OS=Shewanella oneidensis GN=htpG PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 694
            ++ YSNKEIFLREL+SN++DA DK+R+ +LT+ +  +   EL + I  DK   +++I D+G+GMT+  ++ +LGTIA+SGT EF + L+  A
Sbjct:   22 HSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEA 113          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_PSEPK (Chaperone protein htpG OS=Pseudomonas putida (strain KT2440) GN=htpG PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 44/88 (50.00%), Postives = 65/88 (73.86%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNKEIFLRELISN+SDA DK+RFE+L      +   +L I +  DK   ++++ D+GIGM++ D++ +LGTIA+SGT +FM+ L
Sbjct:   25 HSLYSNKEIFLRELISNASDAADKLRFEALAKPELFEGDADLKIRLSFDKDAGTVTLEDNGIGMSREDVIAHLGTIAKSGTADFMKNL 112          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_POLNA (Chaperone protein htpG OS=Polaromonas naphthalenivorans (strain CJ2) GN=htpG PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 43/89 (48.31%), Postives = 65/89 (73.03%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSN +IFLRELISN+SDA DK+RFE+L D    +   EL + +  DK   +L+I D+GIGM++ + + +LGTIA+SGT++F+  L+
Sbjct:   21 HSLYSNPDIFLRELISNASDACDKLRFEALNDAGLYENDSELKVRVSFDKAAKTLTITDNGIGMSQQEAIEHLGTIAKSGTRDFVAKLS 109          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_HAHCH (Chaperone protein htpG OS=Hahella chejuensis (strain KCTC 2396) GN=htpG PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 42/88 (47.73%), Postives = 66/88 (75.00%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNKEIFLREL+SN+SDALDK+RF++L+ +   +   +L + +  D    ++++ D+GIGM++ ++V NLGTIA+SGT EF+  L
Sbjct:   25 HSLYSNKEIFLRELVSNASDALDKLRFQALSKEDLYEGDNDLKVRLEFDDKAQTITLSDNGIGMSRDEVVTNLGTIAKSGTAEFLSTL 112          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BDEBA (Chaperone protein htpG OS=Bdellovibrio bacteriovorus GN=htpG PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 45/86 (52.33%), Postives = 63/86 (73.26%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFME 676
            ++ YS+KEIFLREL+SN+SDA+DK++F SLT  S L    +  I + P+    +L IID+GIGMT+ ++V  +GTIARSG K FM+
Sbjct:   21 HSLYSHKEIFLRELLSNASDAIDKLKFNSLTHPSLLPENWQPAIRLEPNSETKTLKIIDNGIGMTQEEVVEFIGTIARSGAKAFMQ 106          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP82_ENCCU (Heat shock protein 90 OS=Encephalitozoon cuniculi GN=HSP90 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 49/88 (55.68%), Postives = 63/88 (71.59%), Query Frame = 2
Query:  428 YSNKEIFLRELISNSSDALDKIR---FESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            YS+KE+FLREL+SNSSDA DK++   F+       LD    L I IIP+K N +L+I D+GIGMTK DL+N +GTIA SGTK+F E +
Sbjct:   39 YSSKELFLRELVSNSSDACDKLKALYFQLREKGCVLDPVTSLGIEIIPNKDNRTLTIKDNGIGMTKPDLMNFIGTIASSGTKKFREEM 126          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_RICTY (Chaperone protein htpG OS=Rickettsia typhi GN=htpG PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIF+RELISN+SDA DK+R+ S ++   +       I +  DK N  + I D+GIGM K DL+ NLGTIARSGT  F++ L+
Sbjct:   21 HSLYSNKEIFMRELISNASDACDKLRYLSQSNSELISGDSNFKIIVKVDKDNEQIIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLS 109          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_RICRS (Chaperone protein htpG OS=Rickettsia rickettsii (strain Sheila Smith) GN=htpG PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIF+RELISN+SDA DK+R+ S ++   +       I +  DK N  + I D+GIGM K DL+ NLGTIARSGT  F+++L+
Sbjct:   21 HSLYSNKEIFMRELISNASDACDKLRYLSQSNSELVAGDSNFKITVKVDKDNGQIIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLS 109          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_RICRO (Chaperone protein htpG OS=Rickettsia rickettsii (strain Iowa) GN=htpG PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIF+RELISN+SDA DK+R+ S ++   +       I +  DK N  + I D+GIGM K DL+ NLGTIARSGT  F+++L+
Sbjct:   21 HSLYSNKEIFMRELISNASDACDKLRYLSQSNSELVAGDSNFKITVKVDKDNGQIIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLS 109          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_RICM5 (Chaperone protein htpG OS=Rickettsia massiliae (strain Mtu5) GN=htpG PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIF+RELISN+SDA DK+R+ S ++   +       I +  DK N  + I D+GIGM K DL+ NLGTIARSGT  F+++L+
Sbjct:   23 HSLYSNKEIFMRELISNASDACDKLRYLSQSNSELVAGDSNFKITVKVDKDNGQIIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLS 111          
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_SHEON9.395e-1846.74Chaperone protein htpG OS=Shewanella oneidensis GN... [more]
HTPG_PSEPK9.395e-1850.00Chaperone protein htpG OS=Pseudomonas putida (stra... [more]
HTPG_POLNA9.395e-1848.31Chaperone protein htpG OS=Polaromonas naphthaleniv... [more]
HTPG_HAHCH9.395e-1847.73Chaperone protein htpG OS=Hahella chejuensis (stra... [more]
HTPG_BDEBA9.395e-1852.33Chaperone protein htpG OS=Bdellovibrio bacteriovor... [more]
HSP82_ENCCU9.395e-1855.68Heat shock protein 90 OS=Encephalitozoon cuniculi ... [more]
HTPG_RICTY1.227e-1750.56Chaperone protein htpG OS=Rickettsia typhi GN=htpG... [more]
HTPG_RICRS1.227e-1750.56Chaperone protein htpG OS=Rickettsia rickettsii (s... [more]
HTPG_RICRO1.227e-1750.56Chaperone protein htpG OS=Rickettsia rickettsii (s... [more]
HTPG_RICM51.227e-1750.56Chaperone protein htpG OS=Rickettsia massiliae (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
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