CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_METNO (Chaperone protein htpG OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=htpG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17
Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            +  YS +EIFLREL++N++DA+D+ RF +LTD + L    E  + I PDK   +L+I D GIGM K DL  NLGTIARSGT+ F ++LA
Sbjct:   23 HALYSEREIFLRELVANAADAVDRRRFGALTDPA-LALPAEAKVRIRPDKAARTLTISDPGIGMGKEDLAQNLGTIARSGTRAFSQSLA 110          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BACHD (Chaperone protein htpG OS=Bacillus halodurans GN=htpG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17
Identity = 44/84 (52.38%), Postives = 63/84 (75.00%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEF 670
            N+ YS KEIFLRELISN+SDA+DKI + +L+D S    + + FI +  +K + +L++ D+GIGMTK +L +NLGTIA+SG+  F
Sbjct:   19 NSIYSQKEIFLRELISNASDAIDKIYYRALSDDSITFNKDDYFIKVTANKEDRTLTVSDTGIGMTKEELESNLGTIAKSGSLAF 102          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HS904_HUMAN (Putative heat shock protein HSP 90-alpha A4 OS=Homo sapiens GN=HSP90AA4P PE=5 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17
Identity = 44/68 (64.71%), Postives = 55/68 (80.88%), Query Frame = 2
Query:  500 ESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            ESLTD SKLD+  E  I +IP+K + +L+I+D+GIGMTKADL+NNLGTI +S TK FME L AGAD+S
Sbjct:    2 ESLTDPSKLDSGKEPHISLIPNKQDRTLTIVDTGIGMTKADLINNLGTITKSETKVFMEVLQAGADIS 69          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_VIBFI (Chaperone protein htpG (Fragment) OS=Vibrio fischeri GN=htpG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17
Identity = 42/89 (47.19%), Postives = 67/89 (75.28%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLRELISN+SDA DK+RF++L++    +   +L + +  ++  N+L+I D+GIGM++ D++ +LGTIA+SGT +F   L+
Sbjct:   26 HSLYSNKEIFLRELISNASDASDKLRFKALSNGDLYEGNADLGVKLSFNEAANTLTISDNGIGMSREDVIEHLGTIAKSGTADFFSKLS 114          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_VIBF1 (Chaperone protein htpG OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17
Identity = 42/89 (47.19%), Postives = 67/89 (75.28%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLRELISN+SDA DK+RF++L++    +   +L + +  ++  N+L+I D+GIGM++ D++ +LGTIA+SGT +F   L+
Sbjct:   26 HSLYSNKEIFLRELISNASDASDKLRFKALSNGDLYEGNADLGVKLSFNEAANTLTISDNGIGMSREDVIEHLGTIAKSGTADFFSKLS 114          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_RICAH (Chaperone protein htpG OS=Rickettsia akari (strain Hartford) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17
Identity = 45/89 (50.56%), Postives = 63/89 (70.79%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIF+RELISN+SDA DK+R+ S +    + +     I +  DK N  + I D+GIGM K DL++NLGTIARSGT  F+++L+
Sbjct:   21 HSLYSNKEIFMRELISNASDACDKLRYLSQSHSELVASDSNFKITVKVDKDNWQIIIRDNGIGMNKEDLIDNLGTIARSGTANFLKSLS 109          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CHRSD (Chaperone protein htpG OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17
Identity = 43/89 (48.31%), Postives = 66/89 (74.16%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSN+EIFLRELISN++DA DK+R+E+L + +      EL I I  D    ++++ D+GIGM++ +++ NLGTIARSGT EF++ L+
Sbjct:   25 HSLYSNREIFLRELISNAADACDKLRYEALENDTLYGDDSELRIEIEHDAEAGTVTVRDNGIGMSRDEVIQNLGTIARSGTAEFLQQLS 113          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CHLTE (Chaperone protein htpG OS=Chlorobium tepidum GN=htpG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17
Identity = 47/88 (53.41%), Postives = 62/88 (70.45%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ Y++ EIFLRELISN+SDAL K RF  L+    LD   +L I I  DK + S  I D+GIGM++ +L++NLGT+A SGT  FMEAL
Sbjct:   27 HSLYTHPEIFLRELISNASDALGKARFRMLSSDEGLDKSGDLKITITVDKESGSFVIEDTGIGMSEEELISNLGTVASSGTLGFMEAL 114          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BACA2 (Chaperone protein htpG OS=Bacillus amyloliquefaciens (strain FZB42) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17
Identity = 44/86 (51.16%), Postives = 62/86 (72.09%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFME 676
            N+ Y+ KEIFLRELISN+SDA+DKI +++LTD S    Q   +I +  DK   +L++ D+GIGMTK +L  +LGTIA+SG+  F +
Sbjct:   19 NSIYTQKEIFLRELISNASDAIDKIYYKALTDDSLTFDQDNYYIKVTADKEARTLTVTDTGIGMTKDELEQHLGTIAKSGSLAFKQ 104          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_AZOSE (Chaperone protein htpG OS=Azoarcus sp. (strain EbN1) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17
Identity = 42/88 (47.73%), Postives = 63/88 (71.59%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSN+EIFLREL+SN+SDA DK+RFE+L      +   EL I +  D    ++++ D+GIGM++ +++ +LGTIA+SGTKEF   L
Sbjct:   27 HSLYSNREIFLRELVSNASDACDKLRFEALDKPELFEGDSELAIRVGFDSEAKTVTVSDNGIGMSRDEVITHLGTIAKSGTKEFFSQL 114          
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_METNO2.093e-1752.81Chaperone protein htpG OS=Methylobacterium nodulan... [more]
HTPG_BACHD2.093e-1752.38Chaperone protein htpG OS=Bacillus halodurans GN=h... [more]
HS904_HUMAN2.093e-1764.71Putative heat shock protein HSP 90-alpha A4 OS=Hom... [more]
HTPG_VIBFI2.733e-1747.19Chaperone protein htpG (Fragment) OS=Vibrio fische... [more]
HTPG_VIBF12.733e-1747.19Chaperone protein htpG OS=Vibrio fischeri (strain ... [more]
HTPG_RICAH2.733e-1750.56Chaperone protein htpG OS=Rickettsia akari (strain... [more]
HTPG_CHRSD2.733e-1748.31Chaperone protein htpG OS=Chromohalobacter salexig... [more]
HTPG_CHLTE2.733e-1753.41Chaperone protein htpG OS=Chlorobium tepidum GN=ht... [more]
HTPG_BACA22.733e-1751.16Chaperone protein htpG OS=Bacillus amyloliquefacie... [more]
HTPG_AZOSE2.733e-1747.73Chaperone protein htpG OS=Azoarcus sp. (strain EbN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
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