CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: TRAP1_BOVIN (Heat shock protein 75 kDa, mitochondrial OS=Bos taurus GN=TRAP1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17
Identity = 43/92 (46.74%), Postives = 69/92 (75.00%), Query Frame = 2
Query:  422 TFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 697
            + YS KE+F+RELISN+SDAL+K+R + +++   L   P++ IH+  D    +++I D+G+GM++ +LV+NLGTIARSG+K F++AL   A+
Sbjct:  103 SLYSEKEVFIRELISNASDALEKLRHKLVSEGQAL---PDMEIHLQTDADRGTITIQDTGVGMSREELVSNLGTIARSGSKAFLDALQNQAE 191          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB9 (Chaperone protein htpG OS=Shewanella baltica (strain OS195) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17
Identity = 41/89 (46.07%), Postives = 66/89 (74.16%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN++DA DK+R+ +LT+ +  +   EL + I  DK   +++I D+G+GMT+  ++ +LGTIA+SGT +F + L+
Sbjct:   22 HSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLS 110          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB8 (Chaperone protein htpG OS=Shewanella baltica (strain OS185) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17
Identity = 41/89 (46.07%), Postives = 66/89 (74.16%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN++DA DK+R+ +LT+ +  +   EL + I  DK   +++I D+G+GMT+  ++ +LGTIA+SGT +F + L+
Sbjct:   22 HSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLS 110          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB5 (Chaperone protein htpG OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17
Identity = 41/89 (46.07%), Postives = 66/89 (74.16%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN++DA DK+R+ +LT+ +  +   EL + I  DK   +++I D+G+GMT+  ++ +LGTIA+SGT +F + L+
Sbjct:   22 HSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLS 110          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_PSYIN (Chaperone protein htpG OS=Psychromonas ingrahamii (strain 37) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17
Identity = 41/89 (46.07%), Postives = 67/89 (75.28%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIFLREL+SN++DA DK+RF++L+D S  +   +L + +  D    +++I D+GIGM++ +++ +LGTIA+SGT +F E L+
Sbjct:   22 HSLYSNKEIFLRELVSNAADAADKLRFKALSDGSLFENDGDLRVRLSFDADLKTITISDNGIGMSRDEVIEHLGTIAKSGTSDFFEQLS 110          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPL (Chaperone protein htpG OS=Legionella pneumophila (strain Lens) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17
Identity = 46/88 (52.27%), Postives = 66/88 (75.00%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNKEIFLRELISN+SDALDK+RF +L++ S  +   +L I I  ++   +++I D+GIG++  + V NLGTIA+SGTKEF+  L
Sbjct:   23 HSLYSNKEIFLRELISNASDALDKLRFLALSNGSLFENDSDLKISIQINEKLQTITISDNGIGLSWEEAVENLGTIAKSGTKEFISQL 110          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPH (Chaperone protein htpG OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17
Identity = 46/88 (52.27%), Postives = 66/88 (75.00%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNKEIFLRELISN+SDALDK+RF +L++ S  +   +L I I  ++   +++I D+GIG++  + V NLGTIA+SGTKEF+  L
Sbjct:   23 HSLYSNKEIFLRELISNASDALDKLRFLALSNGSLFENDSDLKISIQINEKLQTITISDNGIGLSWEEAVENLGTIAKSGTKEFISQL 110          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPC (Chaperone protein htpG OS=Legionella pneumophila (strain Corby) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17
Identity = 46/88 (52.27%), Postives = 66/88 (75.00%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNKEIFLRELISN+SDALDK+RF +L++ S  +   +L I I  ++   +++I D+GIG++  + V NLGTIA+SGTKEF+  L
Sbjct:   23 HSLYSNKEIFLRELISNASDALDKLRFLALSNGSLFENDSDLKISIQINEKLQTITISDNGIGLSWEEAVENLGTIAKSGTKEFISQL 110          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPA (Chaperone protein htpG OS=Legionella pneumophila (strain Paris) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17
Identity = 46/88 (52.27%), Postives = 66/88 (75.00%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNKEIFLRELISN+SDALDK+RF +L++ S  +   +L I I  ++   +++I D+GIG++  + V NLGTIA+SGTKEF+  L
Sbjct:   23 HSLYSNKEIFLRELISNASDALDKLRFLALSNGSLFENDSDLKISIQINEKLQTITISDNGIGLSWEEAVENLGTIAKSGTKEFISQL 110          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_RICCN (Chaperone protein htpG OS=Rickettsia conorii GN=htpG PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17
Identity = 44/89 (49.44%), Postives = 62/89 (69.66%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIF+RELISN+SDA DK+R+ S ++   +       I +  DK +  + I D+GIGM K DL+ NLGTIARSGT  F+++L+
Sbjct:   21 HSLYSNKEIFMRELISNASDACDKLRYLSQSNSELVAGDSNFKITVKVDKDHRQIIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLS 109          
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
TRAP1_BOVIN3.570e-1746.74Heat shock protein 75 kDa, mitochondrial OS=Bos ta... [more]
HTPG_SHEB93.570e-1746.07Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB83.570e-1746.07Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB53.570e-1746.07Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_PSYIN3.570e-1746.07Chaperone protein htpG OS=Psychromonas ingrahamii ... [more]
HTPG_LEGPL3.570e-1752.27Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_LEGPH3.570e-1752.27Chaperone protein htpG OS=Legionella pneumophila s... [more]
HTPG_LEGPC3.570e-1752.27Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_LEGPA3.570e-1752.27Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_RICCN4.662e-1749.44Chaperone protein htpG OS=Rickettsia conorii GN=ht... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
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