CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_ORITB (Chaperone protein htpG OS=Orientia tsutsugamushi (strain Boryong) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17
Identity = 45/92 (48.91%), Postives = 62/92 (67.39%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 694
            +T Y+NK+IFLRELISN+SDA DK+R+ S ++   L  + +  I +  DK    + + D+GIGM K DL  NLGTIA SGT++F+E L   A
Sbjct:   21 HTLYTNKKIFLRELISNASDACDKLRYLSQSNAELLQGESDFKITVSMDKEKRYIILQDNGIGMNKEDLTQNLGTIASSGTQKFLEQLGNDA 112          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_RICFE (Chaperone protein htpG OS=Rickettsia felis GN=htpG PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNKEIF+RELISN+SDA DK+R+ S ++           I +  DK    + I D+GIGM K DL+ NLGTIARSGT  F+++L+
Sbjct:   21 HSLYSNKEIFMRELISNASDACDKLRYLSQSNSELTSGDSNFKITVKVDKDKGQIIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLS 109          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_PELLD (Chaperone protein htpG OS=Pelodictyon luteolum (strain DSM 273) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17
Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ Y++ EIFLREL+SN+SDAL K RF +LTD +      E  I I  D    + +I D+GIGMT+ +L+ NLGT+ARSGT  FM+AL
Sbjct:   27 HSLYTHPEIFLRELVSNASDALSKARFSALTDDTMAKVSGEAAIRISLDAKTAAFAIEDTGIGMTEEELIANLGTVARSGTLGFMQAL 114          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BACSK (Chaperone protein htpG OS=Bacillus clausii (strain KSM-K16) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17
Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEF 670
            N+ YS KEIFLRELISN+SDA+DK+ + SLTD S    +    I++  DK N  L + D+GIGMTK +L  NLGTIA+SG+  F
Sbjct:   19 NSIYSQKEIFLRELISNASDAIDKMYYRSLTDDSLSFEKDRYAIYVEADKDNRKLVMKDTGIGMTKEELEANLGTIAKSGSLAF 102          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_RHILO (Chaperone protein htpG OS=Rhizobium loti GN=htpG PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.953e-17
Identity = 41/93 (44.09%), Postives = 66/93 (70.97%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 697
            ++ YS+K++FLRELISN++DA +K+RFE+++    L   P+  I I  D  N  +++ D+GIGM++ D+   LGTIARSGT+ F+E + +G +
Sbjct:   26 HSVYSDKDVFLRELISNAADACEKLRFEAVSRPELLGDDPKPRISISADPDNKEITVEDNGIGMSRDDMAEALGTIARSGTRAFIERVGSGTE 118          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_PROVI (Chaperone protein htpG OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.953e-17
Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ Y++ EIFLREL+SN++DAL K RF SLTD   + A  E  IHI  DK      I DSGIGM++ +L+ NLGT+A+SGT  FM++L
Sbjct:   27 HSLYTHPEIFLRELVSNAADALSKARFSSLTDGGLMAAAGEDAIHITLDKEKLLFVIEDSGIGMSEDELIANLGTVAKSGTLGFMQSL 114          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_NOCFA (Chaperone protein htpG OS=Nocardia farcinica GN=htpG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.039e-16
Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ YSNK+ FLRELISN+SDALDK+R ES  DK       +L I +  DK N  L++ D+GIGM++A++V+ +GT+A+SGT E    L+
Sbjct:   23 HSVYSNKDTFLRELISNASDALDKLRLESFKDKDLHVDTADLHIELEVDKDNRILTVRDNGIGMSRAEVVDLIGTLAKSGTAELRRKLS 111          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_DESPS (Chaperone protein htpG OS=Desulfotalea psychrophila GN=htpG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.039e-16
Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            N+ Y+ +++F+RELISNS+DAL+K+R E+LT +  LD    L I I  D+  ++L+I DSGIGMT+ +LVNNLG IA SG+  F   LA
Sbjct:   22 NSLYTERDVFVRELISNSADALEKMRHEALTCQEVLDEDLPLEITIDLDEEAHTLTISDSGIGMTEQELVNNLGVIAHSGSGSFYAELA 110          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_DESDG (Chaperone protein htpG OS=Desulfovibrio desulfuricans (strain G20) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.039e-16
Identity = 42/89 (47.19%), Postives = 66/89 (74.16%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 685
            ++ Y+N+EIFLREL+SN+SDALDK+RF     ++   A  +L I I  ++   +L++ D+GIGMT+ +L++NLGTIA SG++ F++ LA
Sbjct:   27 HSLYTNREIFLRELVSNASDALDKLRFAQTRGEAAPAADLDLNIAITVNEETRTLTVSDTGIGMTRQELIDNLGTIASSGSERFLKELA 115          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CLOPS (Chaperone protein htpG OS=Clostridium perfringens (strain SM101 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.039e-16
Identity = 42/84 (50.00%), Postives = 62/84 (73.81%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEF 670
            N+ Y+N+EIFLRELISN+SDA+DK+ +++L D S    + + +I I P+K   +L+I D GIGMT+ +L  NLG IA+SG+ +F
Sbjct:   19 NSIYTNREIFLRELISNASDAIDKVYYKTLGDSSLTFNKDDYYIKIKPNKEERTLTISDKGIGMTEKELDENLGVIAKSGSLQF 102          
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_ORITB4.662e-1748.91Chaperone protein htpG OS=Orientia tsutsugamushi (... [more]
HTPG_RICFE6.089e-1749.44Chaperone protein htpG OS=Rickettsia felis GN=htpG... [more]
HTPG_PELLD6.089e-1751.14Chaperone protein htpG OS=Pelodictyon luteolum (st... [more]
HTPG_BACSK6.089e-1754.76Chaperone protein htpG OS=Bacillus clausii (strain... [more]
HTPG_RHILO7.953e-1744.09Chaperone protein htpG OS=Rhizobium loti GN=htpG P... [more]
HTPG_PROVI7.953e-1752.27Chaperone protein htpG OS=Prosthecochloris vibriof... [more]
HTPG_NOCFA1.039e-1649.44Chaperone protein htpG OS=Nocardia farcinica GN=ht... [more]
HTPG_DESPS1.039e-1651.69Chaperone protein htpG OS=Desulfotalea psychrophil... [more]
HTPG_DESDG1.039e-1647.19Chaperone protein htpG OS=Desulfovibrio desulfuric... [more]
HTPG_CLOPS1.039e-1650.00Chaperone protein htpG OS=Clostridium perfringens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
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