CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_MYCVP (Chaperone protein htpG OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 697
            ++ YSNK+ FLREL+SN+SDALDK+R ES  +K       +L I I  DK   +L++ D+GIGMT+ ++V+ +GT+A+SGT E  + L    D
Sbjct:   23 HSVYSNKDSFLRELVSNASDALDKLRLESFRNKDLDVDTSDLHIEIDVDKEARTLTVRDNGIGMTRDEVVSLIGTLAKSGTGELRQQLREAKD 115          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BUCCC (Chaperone protein htpG OS=Buchnera aphidicola subsp. Cinara cedri GN=htpG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 46/91 (50.55%), Postives = 61/91 (67.03%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ---PELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNKEIFLRELISN+SDA++KIRFE L    K       P++ I I   K    + I D+GIGMT  +++ NLGTIA+SGTK F+  +
Sbjct:   24 HSLYSNKEIFLRELISNASDAIEKIRFEKLYSLKKYRENLYTPKIKISI--KKDEKKIIISDNGIGMTYKEVIKNLGTIAKSGTKSFLNKI 112          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_BORAP (Chaperone protein htpG OS=Borrelia afzelii (strain PKo) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.959e-15
Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YS+KEIFLRELISN+SDA+DK++F SLT++   +   E  I I  D  + S+ I D+GIGM + +L N+LG IA+SGTKEF+  L
Sbjct:   18 HSLYSHKEIFLRELISNASDAIDKLKFLSLTNEKFKNIALEPKIEITFD--DKSILIKDNGIGMNEQELTNHLGVIAKSGTKEFINNL 103          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_NITWN (Chaperone protein htpG OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15
Identity = 41/90 (45.56%), Postives = 64/90 (71.11%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 688
            ++ YS+K++FLRELISN++DA +++R+E+++D + L  +    I I  D     L++ D+GIGM + +LV+ LGTIARSGTK F+E   A
Sbjct:   29 HSVYSDKDVFLRELISNAADACERLRYEAISDPALLTDETRPRISITIDAERRQLAVEDNGIGMGRDELVDALGTIARSGTKAFIEQAEA 118          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_EXIS2 (Chaperone protein htpG OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15
Identity = 43/84 (51.19%), Postives = 61/84 (72.62%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEF 670
            ++ Y++KEIFLRELISN+SDA+DKI +++LTD++    +    I I P+K    L + D+GIGMTK +L  NLGTIA+SG+  F
Sbjct:   19 HSIYTHKEIFLRELISNASDAMDKIYYKALTDETITFDKDAYKITIEPNKETRQLILRDTGIGMTKDELEENLGTIAKSGSLAF 102          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTU (Chaperone protein htpG OS=Mycobacterium tuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.341e-15
Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DK   +L++ D+GIGM + ++V+ +GT+A+SGT E    L
Sbjct:   23 HSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQL 110          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTA (Chaperone protein htpG OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.341e-15
Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DK   +L++ D+GIGM + ++V+ +GT+A+SGT E    L
Sbjct:   23 HSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQL 110          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_MYCLE (Chaperone protein htpG OS=Mycobacterium leprae GN=htpG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.341e-15
Identity = 45/98 (45.92%), Postives = 68/98 (69.39%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ----PELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADV 700
            ++ YSNK+ FLRELISN+SDALDK+R E+  +K  LD +     +L I I  DK    L++ D+GIGMT+A++V+ +GT+A+SGT +  + L A  ++
Sbjct:   23 HSVYSNKDAFLRELISNASDALDKLRLEAFRNKD-LDPRTVDTSDLHIEIEVDKNTRILTVRDNGIGMTRAEVVDLIGTLAKSGTAKLRQKLHAAKNL 119          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBP (Chaperone protein htpG OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.341e-15
Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DK   +L++ D+GIGM + ++V+ +GT+A+SGT E    L
Sbjct:   23 HSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQL 110          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBO (Chaperone protein htpG OS=Mycobacterium bovis GN=htpG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.341e-15
Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DK   +L++ D+GIGM + ++V+ +GT+A+SGT E    L
Sbjct:   23 HSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQL 110          
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_MYCVP1.500e-1546.24Chaperone protein htpG OS=Mycobacterium vanbaaleni... [more]
HTPG_BUCCC1.500e-1550.55Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_BORAP1.959e-1552.27Chaperone protein htpG OS=Borrelia afzelii (strain... [more]
HTPG_NITWN2.558e-1545.56Chaperone protein htpG OS=Nitrobacter winogradskyi... [more]
HTPG_EXIS22.558e-1551.19Chaperone protein htpG OS=Exiguobacterium sibiricu... [more]
HTPG_MYCTU3.341e-1547.73Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCTA3.341e-1547.73Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCLE3.341e-1545.92Chaperone protein htpG OS=Mycobacterium leprae GN=... [more]
HTPG_MYCBP3.341e-1547.73Chaperone protein htpG OS=Mycobacterium bovis (str... [more]
HTPG_MYCBO3.341e-1547.73Chaperone protein htpG OS=Mycobacterium bovis GN=h... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
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