CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34
Identity = 71/95 (74.74%), Postives = 84/95 (88.42%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL I I+P+    +L+++D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   30 NTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDILPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 124          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.721e-33
Identity = 71/95 (74.74%), Postives = 82/95 (86.32%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISNSSDA DKIR++SLT++S L  +P L I +IPD+ N +L++ DSGIGMTKADLVNNLGTIARSGTK FMEAL AG D+S
Sbjct:   20 NTFYSNKEIFLRELISNSSDACDKIRYQSLTNQSVLGDEPHLRIRVIPDRVNKTLTVEDSGIGMTKADLVNNLGTIARSGTKSFMEALEAGGDMS 114          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.721e-33
Identity = 71/95 (74.74%), Postives = 84/95 (88.42%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD   +L I I+P+  + +L+++D+GIGMTKADLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   30 NTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDTGKDLKIDIVPNPRDPTLTLLDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS 124          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP90_CAEEL (Heat shock protein 90 OS=Caenorhabditis elegans GN=daf-21 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.553e-33
Identity = 70/95 (73.68%), Postives = 84/95 (88.42%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEI+LRELISN+SDALDKIR+++LT+ S+LD   ELFI I P+K   +L+I+D+GIGMTKADLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   23 NTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS 117          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.553e-33
Identity = 70/95 (73.68%), Postives = 84/95 (88.42%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEI+LRELISN+SDALDKIR+++LT+ S+LD   ELFI I P+K   +L+I+D+GIGMTKADLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   23 NTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS 117          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 3.553e-33
Identity = 70/95 (73.68%), Postives = 84/95 (88.42%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLREL+SN+SDALDKIR+ESLTD +KLD+  +L I IIP+    +L++ID+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   29 NTFYSNKEIFLRELVSNASDALDKIRYESLTDPTKLDSGKDLKIDIIPNVQERTLTLIDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 123          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.061e-33
Identity = 69/95 (72.63%), Postives = 85/95 (89.47%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISNSSDALDKIR+++LT+ ++L+   EL+I I P+K + +L+I+D+GIGMTKADLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   25 NTFYSNKEIFLRELISNSSDALDKIRYQALTEPAELETGKELYIKITPNKADKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS 119          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.061e-33
Identity = 70/95 (73.68%), Postives = 80/95 (84.21%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISN+SDA DKIR++SLTD S L   P L I ++PDK N +L++ D+GIGMTKADLVNNLGTIARSGTK FMEAL AG D+S
Sbjct:   20 NTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRLCIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGGDMS 114          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.916e-33
Identity = 71/95 (74.74%), Postives = 83/95 (87.37%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NT YSNKEIFLRELISN SDALDKIR+++L+D SKL++  +L I I PDK N +L+I D+GIGMTKADLVNNLGTIARSGTK+FMEAL AGAD+S
Sbjct:   21 NTVYSNKEIFLRELISNFSDALDKIRYKALSDPSKLESDKDLRIDITPDKENKTLTIRDTGIGMTKADLVNNLGTIARSGTKQFMEALTAGADIS 115          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.303e-32
Identity = 69/95 (72.63%), Postives = 81/95 (85.26%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NT YSNKEIFLRELISN+SDALDKIR++SL+D   LDA+ +LFI I PDK N  LSI D+GIGMTK DL+NNLG IA+SGTK+FMEA A+GAD+S
Sbjct:   22 NTVYSNKEIFLRELISNASDALDKIRYQSLSDPHALDAEKDLFIRITPDKENKILSIRDTGIGMTKNDLINNLGVIAKSGTKQFMEAAASGADIS 116          
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HS90B_MOUSE9.351e-3474.74Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
HSP83_TRYBB2.721e-3374.74Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HS90B_CHICK2.721e-3374.74Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]
HSP90_CAEEL3.553e-3373.68Heat shock protein 90 OS=Caenorhabditis elegans GN... [more]
HSP90_CAEBR3.553e-3373.68Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]
HS90B_DANRE3.553e-3373.68Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
HSP90_BRUPA6.061e-3372.63Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP83_LEIIN6.061e-3373.68Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HSP82_AJECA7.916e-3374.74Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
HSP90_SCHPO2.303e-3272.63Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
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