CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.143e-31
Identity = 70/96 (72.92%), Postives = 83/96 (86.46%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAG-ADVS 703
            NTFYSNKE+FLRELISN+SDALDKIR++SLTD S L+++ EL I IIPDKT  +L++IDSGIGMTK D+V NLGTIARSGTK FME L +G AD+S
Sbjct:   24 NTFYSNKEVFLRELISNASDALDKIRYQSLTDASVLESKTELEIKIIPDKTAKTLTLIDSGIGMTKTDMVKNLGTIARSGTKNFMEQLQSGAADIS 119          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.950e-31
Identity = 65/95 (68.42%), Postives = 82/95 (86.32%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            N FYSNKEIFLRELISN+SDAL+KIR+E++ D  +++ QP+ +I +  DK NN+L+I DSGIGMTKADLVNNLGTIA+SGT+ FMEAL AG+D+S
Sbjct:   28 NAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIEDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMS 122          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.950e-31
Identity = 65/95 (68.42%), Postives = 82/95 (86.32%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            N FYSNKEIFLRELISN+SDAL+KIR+E++ D  +++ QP+ +I +  DK NN+L+I DSGIGMTKADLVNNLGTIA+SGT+ FMEAL AG+D+S
Sbjct:   28 NAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIEDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMS 122          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.950e-31
Identity = 67/95 (70.53%), Postives = 80/95 (84.21%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLR++ISN+SDA DKIR++SLTD S L     L + ++PDK N +L++ D+GIGMTKADLVNNLGTIARSGTK FMEAL AGAD+S
Sbjct:   20 NTFYSNKEIFLRDVISNASDACDKIRYQSLTDPSVLGDATRLCVRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGADMS 114          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.950e-31
Identity = 68/95 (71.58%), Postives = 80/95 (84.21%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NT YSNKEIFLRELISN+SDALDKIR++SL+D  +L+ +P+LFI I P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:   21 NTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 115          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.547e-31
Identity = 67/95 (70.53%), Postives = 81/95 (85.26%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISNSSDA DKIR++SLT+++ L  +  L I ++PDK N +L++ D+GIGMTKA+LVNNLGTIARSGTK FMEAL AG D+S
Sbjct:   20 NTFYSNKEIFLRELISNSSDACDKIRYQSLTNQAVLGDESHLRIRVVPDKANKTLTVEDTGIGMTKAELVNNLGTIARSGTKAFMEALEAGGDMS 114          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.326e-31
Identity = 68/95 (71.58%), Postives = 79/95 (83.16%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NT YSNKEIFLRELISN+SDALDKIR++SL+D   L++ PELFI + P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:   22 NTVYSNKEIFLRELISNASDALDKIRYQSLSDPKVLESDPELFIRLTPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 116          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 135.191 bits (339), Expect = 3.326e-31
Identity = 67/95 (70.53%), Postives = 80/95 (84.21%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NT YSNKEIFLRELISN+SDALDKIR+++L+D  +L+ +P+LFI I P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:   21 NTVYSNKEIFLRELISNASDALDKIRYQALSDPKQLETEPDLFIRITPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 115          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HSP83_DROPB (Heat shock protein 83 (Fragment) OS=Drosophila pseudoobscura bogotana GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.825e-29
Identity = 67/95 (70.53%), Postives = 76/95 (80.00%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFLRELISN+SDALDKIR+ S TD  KL          IP+KT  +L+IID+GI MTK+DLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   23 NTFYSNKEIFLRELISNASDALDKIRYXSXTDPXKLXXXXXXXXXXIPNKTAGTLTIIDTGIXMTKSDLVNNLGTIAKSGTKAFMEALQAGADIS 117          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: H90B4_HUMAN (Putative heat shock protein HSP 90-beta 4 OS=Homo sapiens GN=HSP90AB4P PE=5 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.057e-29
Identity = 64/95 (67.37%), Postives = 79/95 (83.16%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            NTFYSNKEIFL+ELISN+SDALDKIR+ESLTD SKLD   EL I IIP+     L+++++GIGMTKADL+NNLG IA+SGT+ FMEA  + A++S
Sbjct:    6 NTFYSNKEIFLQELISNASDALDKIRYESLTDPSKLDGGKELKIDIIPNPRECILTLVNTGIGMTKADLINNLGAIAKSGTEAFMEAFQSCAEIS 100          
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HSC90_DICDI1.143e-3172.92Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP90_THEPA1.950e-3168.42Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
HSP90_THEAN1.950e-3168.42Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP83_LEIAM1.950e-3170.53Heat shock protein 83 OS=Leishmania amazonensis GN... [more]
HSP82_YEAST1.950e-3171.58ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSP85_TRYCR2.547e-3170.53Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP82_ASHGO3.326e-3171.58Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
HSC82_YEAST3.326e-3170.53ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP83_DROPB1.825e-2970.53Heat shock protein 83 (Fragment) OS=Drosophila pse... [more]
H90B4_HUMAN9.057e-2967.37Putative heat shock protein HSP 90-beta 4 OS=Homo ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
back to top