CF834726

Overview
NameCF834726
Unique NameCF834726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_NITEC (Chaperone protein htpG OS=Nitrosomonas eutropha (strain C91) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.829e-21
Identity = 47/88 (53.41%), Postives = 72/88 (81.82%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNKEIFLRELISN+SDA DK+RFE L+D +  ++ P+L I I  DK   +++I D+GIGM++ ++++N+GTIA+SGT+EF+++L
Sbjct:   25 HSLYSNKEIFLRELISNASDAADKLRFEGLSDTALYESDPDLKIRIAYDKEARTITISDNGIGMSRQEVIDNIGTIAKSGTREFIDSL 112          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_ALHEH (Chaperone protein htpG OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.829e-21
Identity = 48/88 (54.55%), Postives = 70/88 (79.55%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            ++ YSNK+IFLRELISN+SDA+DK+RF+SL D+S L+ + +L I +  DK   ++++ D+GIGMT+ ++  NLGTIARSGTK F++ L
Sbjct:   25 HSLYSNKDIFLRELISNASDAIDKLRFQSLQDESLLEGEGDLRIRVSVDKDARTITVADNGIGMTRDEVAENLGTIARSGTKAFLDQL 112          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.829e-21
Identity = 51/88 (57.95%), Postives = 65/88 (73.86%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 682
            N+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  D+  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   91 NSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDREKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.389e-21
Identity = 57/97 (58.76%), Postives = 68/97 (70.10%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 703
            N+ YSNK+IFLRELISN+SDALDKIRF +LTDK  L      +L I I  DK    LSI D GIGMTK DL+ NLGTIA+SGT  F+E +    D++
Sbjct:   95 NSLYSNKDIFLRELISNASDALDKIRFLALTDKEILGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLN 191          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJR (Chaperone protein htpG OS=Campylobacter jejuni (strain RM1221) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.951e-21
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 694
            ++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   +LSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:   16 HSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJJ (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.951e-21
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 694
            ++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   +LSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:   16 HSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJE (Chaperone protein htpG OS=Campylobacter jejuni GN=htpG PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.951e-21
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 694
            ++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   +LSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:   16 HSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJD (Chaperone protein htpG OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.951e-21
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 694
            ++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   +LSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:   16 HSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKNDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJ8 (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.951e-21
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 694
            ++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   +LSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:   16 HSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of CF834726 vs. ExPASy Swiss-Prot
Match: HTPG_THICR (Chaperone protein htpG OS=Thiomicrospira crunogena (strain XCL-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21
Identity = 48/86 (55.81%), Postives = 69/86 (80.23%), Query Frame = 2
Query:  419 NTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFME 676
            +  YSNKEIFLREL+SN+SDALDK+RFES+++ +  + + EL I +  DK   ++SIID+GIGMT+ +++ N+GTIA SGTK+F+E
Sbjct:   22 HALYSNKEIFLRELVSNASDALDKLRFESVSNDALSEGESELAIQVGFDKEARTVSIIDNGIGMTRDEVIANIGTIANSGTKKFLE 107          
The following BLAST results are available for this feature:
BLAST of CF834726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_NITEC1.829e-2153.41Chaperone protein htpG OS=Nitrosomonas eutropha (s... [more]
HTPG_ALHEH1.829e-2154.55Chaperone protein htpG OS=Alkalilimnicola ehrliche... [more]
ENPL_RAT1.829e-2157.95Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]
ENPL_CATRO2.389e-2158.76Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]
HTPG_CAMJR6.951e-2158.70Chaperone protein htpG OS=Campylobacter jejuni (st... [more]
HTPG_CAMJJ6.951e-2158.70Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CAMJE6.951e-2158.70Chaperone protein htpG OS=Campylobacter jejuni GN=... [more]
HTPG_CAMJD6.951e-2158.70Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CAMJ86.951e-2158.70Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_THICR9.078e-2155.81Chaperone protein htpG OS=Thiomicrospira crunogena... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834726 ID=CF834726; Name=CF834726; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTATACATTGCACTCGAAGCTAGCAAATATCTTTTCTGACTTGAAG
AATATGAAAACTCTTCCTGGCGCAGGTATGAGCGATCCGTCAGAAGGTTA
CTTACTCCCCCCTTCCAGTATTGCTGATGATGATGTTGGGAATGACAATC
TTGATCTTATTGTTATTCCTCAATATGGGAGAAATCCTGATTATTATGGG
TAAGTGTCTGCAATCTGGATGATGATATATATAATTAAATAAAAAGATGG
GTACAGTTATTATCTATCAATTATAAGAGTGTCAATTTAGTTCAGTTCAC
TTACAAAAATCTCTTATACAAGAGATTATCTTTGTTTGCGTTCATGTACT
TTGTCTTCTTTAATTAATAAATAAAACTATTGTGTAAAAAAAAAAAAAAG
TTGTTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCT
TCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTG
AAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATT
CACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGG
TATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTA
GGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTG
AGC
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