CF834727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834727 vs. ExPASy Swiss-Prot
Match: RL11A_YEAST (60S ribosomal protein L11-A OS=Saccharomyces cerevisiae GN=RPL11A PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 4.056e-41 Identity = 85/135 (62.96%), Postives = 99/135 (73.33%), Query Frame = -3 Query: 254 LSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILNK 658 LSGQTPV SKARYTVR+FGIRRNEKIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGI EHIDLGIKYDPS GI+GMDF+VV+ G H+ TKED + WF+ KY+ +L+K Sbjct: 40 LSGQTPVQSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLDK 174
BLAST of CF834727 vs. ExPASy Swiss-Prot
Match: RL11_ASHGO (60S ribosomal protein L11 OS=Ashbya gossypii GN=RPL11 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.298e-41 Identity = 82/135 (60.74%), Postives = 101/135 (74.81%), Query Frame = -3 Query: 254 LSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILNK 658 LSGQTPV SKARYTVR+FGIRRNEKIA +VT+RG K+ ++LE GLKVKEY+L +NFS+TG FGFGIQEHIDLGIKYDPS GIYGMDF+VV+ G H+ +KED + WF+ +Y+ +L+K Sbjct: 40 LSGQTPVHSKARYTVRTFGIRRNEKIAVHVTIRGPKSEEILERGLKVKEYQLRTKNFSETGNFGFGIQEHIDLGIKYDPSIGIYGMDFYVVMGRPGGRVSRRKRCRSTVGNSHKTSKEDTIAWFKQRYDADVLDK 174
BLAST of CF834727 vs. ExPASy Swiss-Prot
Match: RL11_NEUCR (60S ribosomal protein L11 OS=Neurospora crassa GN=rpl-11 PE=3 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 6.919e-41 Identity = 79/132 (59.85%), Postives = 99/132 (75.00%), Query Frame = -3 Query: 263 LSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVI 658 LSGQTPV+SKARYTVR+FGIRRNEKI+ +VTVRG KA ++LE GLKVKEYEL +RNFS+TG FGFGI EHIDLGIKYDP GIYGMDF+ + G HR+T++D +KWF+ +++ ++ Sbjct: 42 LSGQTPVYSKARYTVRTFGIRRNEKISVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPGIGIYGMDFYCCMTRPGERVSRRRRAKSRVGATHRITRDDTVKWFKSRFDAIV 173
BLAST of CF834727 vs. ExPASy Swiss-Prot
Match: RL11_CANGA (60S ribosomal protein L11 OS=Candida glabrata GN=RPL11 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 9.036e-41 Identity = 83/135 (61.48%), Postives = 100/135 (74.07%), Query Frame = -3 Query: 254 LSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILNK 658 LSGQTPV SKARYTVR+FGIRRNEKIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGIQEHIDLGIKYDPS GI+GMDF++V+ G H+ +KED + WF+ +Y+ +L+K Sbjct: 40 LSGQTPVQSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSTTGNFGFGIQEHIDLGIKYDPSIGIFGMDFYIVMGRPGNRIARRKRCRATVGNSHKTSKEDTIAWFKQRYDADVLDK 174
BLAST of CF834727 vs. ExPASy Swiss-Prot
Match: RL11_LEICH (60S ribosomal protein L11 OS=Leishmania chagasi GN=RPL11 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.629e-40 Identity = 85/132 (64.39%), Postives = 96/132 (72.73%), Query Frame = -3 Query: 263 LSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVI 658 L QTPV S+AR TVR+FGIRRNEKIA + TVRG KA +LLE GLKVKE+EL NFSDTG FGFGI EHIDLGIKYDPSTGIYGMDF+VVL G H VTKE+AMKWF+ ++G+I Sbjct: 42 LCEQTPVLSRARLTVRTFGIRRNEKIAVHCTVRGKKAEELLEKGLKVKEFELKSYNFSDTGSFGFGIDEHIDLGIKYDPSTGIYGMDFYVVLGRRGERVAHRKRKCSRVGHSHHVTKEEAMKWFEKVHDGII 173
BLAST of CF834727 vs. ExPASy Swiss-Prot
Match: RL11_LEIMA (60S ribosomal protein L11 OS=Leishmania major GN=RPL11 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 5.857e-40 Identity = 84/132 (63.64%), Postives = 96/132 (72.73%), Query Frame = -3 Query: 263 LSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVI 658 L QTPV S+AR TVR+FGIRRNEKIA + TVRG KA +LLE GLKVKE+EL NF+DTG FGFGI EHIDLGIKYDPSTGIYGMDF+VVL G H VTKE+AMKWF+ ++G+I Sbjct: 42 LCEQTPVLSRARLTVRTFGIRRNEKIAVHCTVRGKKAEELLEKGLKVKEFELKSYNFADTGSFGFGIDEHIDLGIKYDPSTGIYGMDFYVVLGRRGERVAHRKRKCSRVGHSHHVTKEEAMKWFEKVHDGII 173
BLAST of CF834727 vs. ExPASy Swiss-Prot
Match: RL11_TETTH (60S ribosomal protein L11 OS=Tetrahymena thermophila GN=RPL11 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.704e-39 Identity = 78/130 (60.00%), Postives = 98/130 (75.38%), Query Frame = -3 Query: 269 LSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEG 658 LSGQ PVFS+ARYT+RSFGI+RNEK+A +VT+RGDKA +L GLKVKE EL ++NFS+TG FGFGIQEHIDLG+KYDPSTGI+GMDF+VVLE G ++KE+ + WF+ ++EG Sbjct: 40 LSGQEPVFSRARYTIRSFGIKRNEKMAVHVTIRGDKARDILTRGLKVKEMELRKKNFSNTGNFGFGIQEHIDLGMKYDPSTGIFGMDFYVVLERPGTRVARRRRATSRVGNNQMISKEECINWFKTEFEG 169
BLAST of CF834727 vs. ExPASy Swiss-Prot
Match: RL11_ENCCU (60S ribosomal protein L11 OS=Encephalitozoon cuniculi GN=RPL11 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.950e-35 Identity = 75/133 (56.39%), Postives = 92/133 (69.17%), Query Frame = -3 Query: 260 LSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVIL 658 L+GQ PV SKAR T+R+FGIRRNEKIA +V V G KA +LL + L+VKEYEL FS+ GCFGFGI+EHIDLG+KYDP+ GI+GMDFFV+L G + RV EDA KWF +EGV++ Sbjct: 32 LTGQKPVTSKARMTIRNFGIRRNEKIAVHVNVSGKKAYELLNTALRVKEYELKESCFSNNGCFGFGIEEHIDLGLKYDPNIGIFGMDFFVILARPGDRVSKRKRCKSRVGNKQRVYAEDAKKWFVENFEGVLV 164
BLAST of CF834727 vs. ExPASy Swiss-Prot
Match: RL11_TOXCA (60S ribosomal protein L11 (Fragment) OS=Toxocara canis GN=RPL11 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.143e-28 Identity = 60/76 (78.95%), Postives = 67/76 (88.16%), Query Frame = -3 Query: 431 LSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIK 658 L+GQTPVFSKARYTVR+FGIRRNEKIA + TVRG KA ++LE GLKVKEYEL + NFSDTG FG G+QEHIDLGIK Sbjct: 50 LTGQTPVFSKARYTVRTFGIRRNEKIAVHCTVRGPKAEEILEKGLKVKEYELYKENFSDTGNFGLGVQEHIDLGIK 125
BLAST of CF834727 vs. ExPASy Swiss-Prot
Match: RL5_ARCFU (50S ribosomal protein L5P OS=Archaeoglobus fulgidus GN=rpl5p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.357e-20 Identity = 52/123 (42.28%), Postives = 72/123 (58.54%), Query Frame = -3 Query: 284 QTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQ 649 Q P + A+ T+++FGIR+ E I VT+RG+KA++ L+ L VKE L R++ + G F FGI EHIDL G+ YDP GI+GMD V L+ HRVTKED ++W + Sbjct: 50 QKPAITYAKMTIKNFGIRKGEAIGIKVTLRGEKALKFLKDALTVKENRLSRKSIGE-GYFAFGIAEHIDLPGVDYDPDVGIFGMDVCVSLKRRGYRVARRRRKKAKIATSHRVTKEDTIRWLE 171 The following BLAST results are available for this feature:
BLAST of CF834727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834727 ID=CF834727; Name=CF834727; organism=Citrus sinensis; type=EST; length=660bpback to top |