CF834728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834728 vs. ExPASy Swiss-Prot
Match: RL11A_YEAST (60S ribosomal protein L11-A OS=Saccharomyces cerevisiae GN=RPL11A PE=1 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 1.157e-57 Identity = 112/171 (65.50%), Postives = 131/171 (76.61%), Query Frame = 1 Query: 31 KLSNPMREIMVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNK 543 K NPMR++ ++KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVR+FGIRRNEKIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGI EHIDLGIKYDPS GI+GMDF+VV+ H+ TKED + WF+ KY+ +L+K Sbjct: 4 KAQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLDK 174
BLAST of CF834728 vs. ExPASy Swiss-Prot
Match: RL11_DICDI (60S ribosomal protein L11 OS=Dictyostelium discoideum GN=rpl11 PE=2 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 1.511e-57 Identity = 109/173 (63.01%), Postives = 131/173 (75.72%), Query Frame = 1 Query: 19 SSEKKLSNPMREIMVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 537 + + K N MR + ++KLVLNI VGESGDRL RAAKVLEQL+GQTPV+SKARYTVRSF IRRNE+IA +VTVRG+KA ++LE GLKV+E+EL RNFS G FGFGIQEHIDLGIKYDPS GIYGMDFFVVL QH++ KEDA+ WF+ Y+G+++ Sbjct: 26 TKKSKKDNVMRGLRIEKLVLNICVGESGDRLVRAAKVLEQLTGQTPVYSKARYTVRSFNIRRNEQIAAHVTVRGEKAAEILEKGLKVREFELRARNFSTQGSFGFGIQEHIDLGIKYDPSIGIYGMDFFVVLSRPGFRVAHKKRAGAKVGFQHKIGKEDAVNWFKTTYDGIVI 198
BLAST of CF834728 vs. ExPASy Swiss-Prot
Match: RL11_LEICH (60S ribosomal protein L11 OS=Leishmania chagasi GN=RPL11 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.973e-57 Identity = 114/173 (65.90%), Postives = 131/173 (75.72%), Query Frame = 1 Query: 16 MSSEKKLSNPMREIMVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVI 534 M +E K +NPMREI+V+KL +NI VGESGDRLTRA+KVLEQL QTPV S+AR TVR+FGIRRNEKIA + TVRG KA +LLE GLKVKE+EL NFSDTG FGFGI EHIDLGIKYDPSTGIYGMDF+VVL H VTKE+AMKWF+ ++G+I Sbjct: 1 MVAESKAANPMREIVVKKLCINICVGESGDRLTRASKVLEQLCEQTPVLSRARLTVRTFGIRRNEKIAVHCTVRGKKAEELLEKGLKVKEFELKSYNFSDTGSFGFGIDEHIDLGIKYDPSTGIYGMDFYVVLGRRGERVAHRKRKCSRVGHSHHVTKEEAMKWFEKVHDGII 173
BLAST of CF834728 vs. ExPASy Swiss-Prot
Match: RL11_LEIMA (60S ribosomal protein L11 OS=Leishmania major GN=RPL11 PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 4.396e-57 Identity = 113/173 (65.32%), Postives = 131/173 (75.72%), Query Frame = 1 Query: 16 MSSEKKLSNPMREIMVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVI 534 M +E K +NPMREI+V+KL +NI VGESGDRLTRA+KVLEQL QTPV S+AR TVR+FGIRRNEKIA + TVRG KA +LLE GLKVKE+EL NF+DTG FGFGI EHIDLGIKYDPSTGIYGMDF+VVL H VTKE+AMKWF+ ++G+I Sbjct: 1 MVAESKAANPMREIVVKKLCINICVGESGDRLTRASKVLEQLCEQTPVLSRARLTVRTFGIRRNEKIAVHCTVRGKKAEELLEKGLKVKEFELKSYNFADTGSFGFGIDEHIDLGIKYDPSTGIYGMDFYVVLGRRGERVAHRKRKCSRVGHSHHVTKEEAMKWFEKVHDGII 173
BLAST of CF834728 vs. ExPASy Swiss-Prot
Match: RL11_SPOFR (60S ribosomal protein L11 OS=Spodoptera frugiperda GN=RpL11 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 7.498e-57 Identity = 117/171 (68.42%), Postives = 130/171 (76.02%), Query Frame = 1 Query: 40 NPMREIMVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRV-TKEDAMKWFQVKYEGVILNKSQ 549 N MR + ++KL LNI VGESGDRLTRAAKVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL I V TKEDAMKWFQ KY+G+ILN + Sbjct: 25 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGPTRIQCTTQKTQDWQGWIPPIVLTKEDAMKWFQQKYDGIILNSKK 195
BLAST of CF834728 vs. ExPASy Swiss-Prot
Match: RL11_CANGA (60S ribosomal protein L11 OS=Candida glabrata GN=RPL11 PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.279e-56 Identity = 110/171 (64.33%), Postives = 131/171 (76.61%), Query Frame = 1 Query: 31 KLSNPMREIMVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNK 543 K N MRE+ ++KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVR+FGIRRNEKIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGIQEHIDLGIKYDPS GI+GMDF++V+ H+ +KED + WF+ +Y+ +L+K Sbjct: 4 KTQNVMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSTTGNFGFGIQEHIDLGIKYDPSIGIFGMDFYIVMGRPGNRIARRKRCRATVGNSHKTSKEDTIAWFKQRYDADVLDK 174
BLAST of CF834728 vs. ExPASy Swiss-Prot
Match: RL11_TETTH (60S ribosomal protein L11 OS=Tetrahymena thermophila GN=RPL11 PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.496e-52 Identity = 99/166 (59.64%), Postives = 125/166 (75.30%), Query Frame = 1 Query: 31 KLSNPMREIMVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEG 528 K N MRE+ + KLV+N VGESGD+LT+AAKVL+ LSGQ PVFS+ARYT+RSFGI+RNEK+A +VT+RGDKA +L GLKVKE EL ++NFS+TG FGFGIQEHIDLG+KYDPSTGI+GMDF+VVLE ++KE+ + WF+ ++EG Sbjct: 4 KKENKMREVKIAKLVINCCVGESGDKLTKAAKVLKDLSGQEPVFSRARYTIRSFGIKRNEKMAVHVTIRGDKARDILTRGLKVKEMELRKKNFSNTGNFGFGIQEHIDLGMKYDPSTGIFGMDFYVVLERPGTRVARRRRATSRVGNNQMISKEECINWFKTEFEG 169
BLAST of CF834728 vs. ExPASy Swiss-Prot
Match: RL11_ENCCU (60S ribosomal protein L11 OS=Encephalitozoon cuniculi GN=RPL11 PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.263e-45 Identity = 93/164 (56.71%), Postives = 115/164 (70.12%), Query Frame = 1 Query: 46 MREIMVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 537 MREI ++KL ++I ESG +L RAAKVLEQL+GQ PV SKAR T+R+FGIRRNEKIA +V V G KA +LL + L+VKEYEL FS+ GCFGFGI+EHIDLG+KYDP+ GI+GMDFFV+L + RV EDA KWF +EGV++ Sbjct: 1 MREISIKKLSIHICARESGAKLDRAAKVLEQLTGQKPVTSKARMTIRNFGIRRNEKIAVHVNVSGKKAYELLNTALRVKEYELKESCFSNNGCFGFGIEEHIDLGLKYDPNIGIFGMDFFVILARPGDRVSKRKRCKSRVGNKQRVYAEDAKKWFVENFEGVLV 164
BLAST of CF834728 vs. ExPASy Swiss-Prot
Match: RL11_TOXCA (60S ribosomal protein L11 (Fragment) OS=Toxocara canis GN=RPL11 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.507e-44 Identity = 89/114 (78.07%), Postives = 98/114 (85.96%), Query Frame = 1 Query: 25 EKKLSNPMREIMVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIK 366 EKK N MRE+ +QKL LNI VGE GDRLTRAAKVLEQL+GQTPVFSKARYTVR+FGIRRNEKIA + TVRG KA ++LE GLKVKEYEL + NFSDTG FG G+QEHIDLGIK Sbjct: 12 EKKARNVMRELKIQKLCLNICVGEFGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRRNEKIAVHCTVRGPKAEEILEKGLKVKEYELYKENFSDTGNFGLGVQEHIDLGIK 125
BLAST of CF834728 vs. ExPASy Swiss-Prot
Match: RL5_ARCFU (50S ribosomal protein L5P OS=Archaeoglobus fulgidus GN=rpl5p PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.197e-32 Identity = 73/171 (42.69%), Postives = 103/171 (60.23%), Query Frame = 1 Query: 4 QQTRMSSEKKLSNPMREIMVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQ 513 Q M + NPMRE+++ K+V+NI VGESG+R +A +LE+L Q P + A+ T+++FGIR+ E I VT+RG+KA++ L+ L VKE L R++ + G F FGI EHIDL G+ YDP GI+GMD V L+ HRVTKED ++W + Sbjct: 2 QAVEMEKKAGNENPMREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTIKNFGIRKGEAIGIKVTLRGEKALKFLKDALTVKENRLSRKSIGE-GYFAFGIAEHIDLPGVDYDPDVGIFGMDVCVSLKRRGYRVARRRRKKAKIATSHRVTKEDTIRWLE 171 The following BLAST results are available for this feature:
BLAST of CF834728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834728 ID=CF834728; Name=CF834728; organism=Citrus sinensis; type=EST; length=802bpback to top |